Synechococcus elongatus PCC7942: Synpcc7942_1905
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Entry
Synpcc7942_1905 CDS
T00300
Name
(GenBank) cyclic nucleotide-binding domain (cNMP-BD) protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
syf
Synechococcus elongatus PCC7942
Pathway
syf02010
ABC transporters
syf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
syf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Synpcc7942_1905
03070 Bacterial secretion system
Synpcc7942_1905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syf02000
]
Synpcc7942_1905
02044 Secretion system [BR:
syf02044
]
Synpcc7942_1905
Transporters [BR:
syf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Synpcc7942_1905
Secretion system [BR:
syf02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Synpcc7942_1905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
cNMP_binding
AAA_22
AAA_29
nSTAND3
ABC_ATPase
DUF87
AAA_16
AAA_30
AAA_21
RsgA_GTPase
ABC_membrane_3
Motif
Other DBs
NCBI-ProteinID:
ABB57935
UniProt:
Q31LY4
LinkDB
All DBs
Position
complement(1979496..1982498)
Genome browser
AA seq
1000 aa
AA seq
DB search
MVAIPSNLCELLAGQAYFQAYPAAAYEPWRAQLQLGKFAVGQPLLPPEQLPSHVLVVLSG
QIRVVYQPVGQVRGISLGRFGAGACLGWAPLLRGCPGEASSGSEAGAVLAIPAAAFLDML
KQLPDLAQAFGSQAAPSEVMSVLQAQSWPSPLTVQEWSAFVQELLPQTRVQLVDTVHSGA
NTLLSRDYDWYVSGNNGTSALGLPIDLEAAIPSPKGSLALRLLGLPAGTVAQRQTRNHHD
AVGTSEEPSTAATTDSATVTDSPSPWTSTVPADLSADLYDGSQRSQKFPVERGNDPVSEA
QACLKMIARSLKIPFRRDQVQRVIEEQYRRLKSISLQELAVLLEMQALRSQILQLRLVDL
PRVPLPALIAWEEGHAVLYAVDATSITFADPRQGLITLSLAEFQQRWGNAGTILLATKTQ
FTQSQRFGLSWFWPSIQRYRVRLIEVLIASLVVQLFTLANPLIIQQVIDKVIGQGSLNNL
NSFAVLLVILGVFQGLLSSLRTYLFADTTNRIDLKLGSDIIDRLLKLPLRYFERRPVGEL
SSRVQELEKIRSFLTGTALTTVMDAMFSVIYILVMLVYSWFLTLVALSTVPIFVAITFFA
SPVVRRQLREKAERNAETQSQLVEVLSGIQTVKAQNIELKARWQWQERYARYIAAGFRNI
NTSTAASSLTNFFNQLSGLLVLWVGVYLVFDNQLSLGQLIAFRIISGYVTQPLLRLAQLW
QNFQETALSLERLADIVDTPQESDDDDQGKIPMPMINGKVEFRNLSFRFGEQGPLQLSNV
TLEIPAGEYVGIVGQSGSGKSTLMKLLPRLYSPLEGEILIDGYDISKVELYSLRRQIGIV
PQDSLLFQGTVEENISLTKPNATTDEIITAAKAAGAHDFIMTLPLGYNTRVGERGGALSG
GQRQRIAIARTVLQNPQLLILDEATSALDYDTERQVSINLQQHFRGKTVFFITHRLSTVR
HADRIIVMDKGAMVEQGSHDELMELRGRYFCLYRQQDALN
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggttgctattccttcgaacctctgtgaacttctagcagggcaagcctattttcaggcc
tatcctgccgcggcctatgaaccgtggcgagcacaactccagctgggtaagtttgcagtt
ggtcaacctttactccccccagagcagctgcccagtcatgtcttagttgtcttgagtggc
cagattcgggttgtctatcagccggtgggtcaggttcgaggaattagcttaggccgcttc
ggcgctggggcttgtcttggctgggcacctctgttgcggggatgccccggagaagcgagt
agtggatctgaggcaggagctgttctcgcgattccagctgctgccttcttagacatgctg
aagcagttgccagacttggctcaggcttttggcagccaagccgcgcctagtgaggtgatg
tcggttttacaggcccagtcttggcccagtccactcaccgttcaggagtggtcggccttt
gtccaagagttattgccccagacgcgggtgcagcttgtggatacggtacatagcggtgct
aacacgctgttgtctagggactacgactggtatgtgagtggtaacaatggcacctcggcg
cttggtctgccgattgatctggaggctgcgattccctcgcctaagggtagtctggccctg
cgcttgcttgggttgcctgcaggaactgttgcgcaacggcagacgcgcaaccaccatgac
gctgtaggaacttcagaagaaccttcaacggctgctactacagatagtgccactgttacc
gattcaccttcgccttggacctctaccgtccctgctgatctgtcagcggacctctacgac
ggcagtcagcgcagtcaaaaattcccagtcgagcgcggaaatgatcccgtgagtgaggca
caagcctgcctcaaaatgatcgcgcgatcgctcaaaattccttttcgccgcgaccaagtt
caacgcgttattgaagaacaatatcgacgcctcaaatcaatttctctgcaagagctcgca
gtgttgctggaaatgcaggcgctgcgcagtcagattttgcagctacgtctggttgatttg
ccccgagtgcctttacctgcgctgattgcttgggaagaaggccatgctgtgctttacgcg
gttgatgcaactagcatcacttttgccgatcctcgacaaggcttaataacgctttctttg
gcggaatttcagcagcgctggggcaacgctggcactattttgctggccaccaaaacccag
ttcacccaaagtcaacgttttggcctgagctggttttggccttcaatccaacgctaccga
gtgcgcttgattgaggtgctgattgcctcactagtcgttcagctgtttacgctagccaat
cccctaattatccaacaggtgattgacaaggttatcggccaaggcagtcttaataacctc
aatagctttgctgtcttactggttatcttaggtgttttccaagggctgctcagcagccta
agaacctatctttttgctgatacaactaaccgtattgacctcaagctaggcagtgacatt
atcgatcgactactgaagttacctctgcgctatttcgagcggcgacctgtaggggaactg
agtagccgggttcaagagctggaaaaaattcgtagttttctgactggcacagctctcaca
accgtgatggatgcgatgttctcggtcatctacatcctagtcatgctggtttatagctgg
ttcttgacactggttgcactctcgacagtccccatctttgtagccatcacattttttgcc
tcgccggtagttagacggcaactgcgggaaaaagcagaacggaatgctgaaacacagtcc
caacttgttgaggttttgagtggtatccagactgttaaagctcaaaatattgaactcaaa
gcccgttggcagtggcaagagcgctatgcccgttatattgccgcaggattccgtaacatc
aacacgtcaactgcggcgtcttcactcaccaatttctttaaccaactgtcaggcttactc
gttctttgggtgggtgtgtatttagtattcgacaaccaattgagccttggtcaactgatt
gcattccgtattatttctggttacgttacccaaccgttattacgactcgctcagttgtgg
caaaacttccaagagacagctctatcgcttgagcgtttggccgatatcgttgacaccccc
caagaatcggatgatgacgaccagggcaagattccaatgccaatgatcaacggcaaagtt
gaatttcggaatctaagcttccgctttggcgaacaagggccattgcagctttcgaacgtg
acgctggagatacctgctggtgagtacgttggtattgttgggcagagcggctctggcaag
agtaccctcatgaaacttttgccaagactttactcgccgcttgaaggtgagattttgatt
gatggctacgatatcagcaaggttgaactatattcccttcggcgccaaatcggcattgtt
cctcaagatagtttgcttttccaaggaaccgtcgaagaaaatatctctttaacgaagccg
aatgcaacaactgacgaaatcattactgctgctaaagcggcaggtgctcatgatttcatc
atgactttgcctttaggctataacactcgtgttggtgagcgtggtggtgccctttcgggc
ggccaacgacaacgaattgcgatcgctagaaccgtcttgcaaaatcctcagcttttgatc
cttgacgaggcaacgagcgccctagactatgatacggagcgtcaggtcagcatcaacctc
caacaacatttccggggcaaaacagtattcttcattactcaccgcctaagtacagtccga
catgctgaccgaattatcgttatggataagggagctatggttgaacagggtagccatgat
gaattaatggaacttagaggtcgctatttctgtctatatcgtcaacaagatgctttgaac
taa
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