Synechococcus elongatus PCC7942: Synpcc7942_2563
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Entry
Synpcc7942_2563 CDS
T00300
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
syf
Synechococcus elongatus PCC7942
Brite
KEGG Orthology (KO) [BR:
syf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syf03400
]
Synpcc7942_2563
DNA repair and recombination proteins [BR:
syf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Synpcc7942_2563
Archaeal homologous recombinant proteins
Synpcc7942_2563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
Rad50_zn_hook
AAA_21
AAA_29
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABB58593
UniProt:
Q54762
LinkDB
All DBs
Position
2641349..2644351
Genome browser
AA seq
1000 aa
AA seq
DB search
MILLRLQLHHFLSYREADLALGQQLVVVSGVSGSGKTALLEAIAWALWGQSLRGDSQDLI
QDSADWMAVTLEFQQSHQQFQVQRRHDRQTGTQLQLWQRSHPDEPWAEISQSTAIATQAQ
LTQVLGWDYTHFCHTVYVPQGQPSPWVQRSASDRYQQLAHLFQLDRLRPLALAARDRDRS
LQAEEEWFFAQRQQLQQQADQQQQLAETRSQYQQQLAALQQQRAAIDQQQQTLEQRWQAA
EHQQRDRQALAQQIQQLQTQLGDQQRLLAENQQRQAQAQHILSRALSIRAEWQQWQQSQQ
QASRWAQQTEAQQALSEQLQQVQRQYDAAVRQHQQAIATVQQQLQAGQEALVQFEPLLQQ
ATAIAAGYQQLQQARQELAQAQQRHTAAQPLLAQRQQVQTQLGQARLRLQAHLEDLQGQR
LQLRQQHRDRGELEQALASVSQTITQLEQHQHYRNQVQEKQQERSNFLARLQARQRDYEA
QLAELESQARAIAPHGTCPLCDQALDPDHWQHLQQRYQQQQTEIQNLIWVICEQFAVSER
EIQVLRQEYRDRAVDLEPYSQALEERGKLQAQLVAHDEQTQQLQQLDQQIQTLERSLAAG
DFAPDLQRRVRQLDRQIQELGYRDRDLNLAQQTVDQWQAIAERYAALQAAQAQQQRWDQE
RPRLETQLRDLQQALNHLSDSPLGQHRQQLQRQLQQVEASLRGLTDPQAAPPQAEVAERY
QALLQAEQAMPRLQAEQADLEAQVQQLQKILTASLAQQAAIATAEDRQPLQQAIADCQAQ
LQAIQAAQTNLEQAIAQLPPSRNLEAIHAQIARLDEQLQQIQQEQQPAQQLATLVDRADF
TVPLMRQWLRHLQLRCQHWLDRWGWEQGQLLWQVVSPASGAPGVQLRLQTDQGDRSINTC
ADGEAVLLDLAIRLSLVQLLAQQPDRSSRLLILDAPFSSLNPQQKNALTAALTEELDQGL
ICEADSSVKAIAADTWHVVLQNQESQLTALREAATGTGAD
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgattctgctgcgtcttcagctgcaccactttctcagttaccgggaggctgatctcgcg
ctcgggcagcagcttgtggttgtaagcggggtgtcgggatcaggcaaaaccgctctactc
gaggcaattgcatgggcgctgtggggtcagagtctgcgcggagacagtcaagacttgatc
caagactctgcggactggatggcagtgacgctggagtttcagcagagccatcagcagttt
caagtccagcgccgccacgatcgccaaacgggcacccagctccagctctggcagcgatcg
cacccggatgagccctgggctgagatcagtcaatcgacggcgatcgccacgcaagcgcag
ctgactcaggtgctgggctgggattacacccacttctgtcacacggtctatgtaccccaa
gggcagccatcaccttgggtgcagcgttcagccagcgatcgctatcaacaactcgcccac
ctcttccagctcgatcgtctccggcccttagccttggccgcccgcgatcgcgatcggagt
ttgcaggctgaagaggagtggttcttcgctcagcggcagcagctccagcagcaagcagac
cagcaacaacaactggctgaaacgcgatcgcaataccagcaacaattggccgcactgcag
cagcagcgagccgcaatcgatcaacagcagcaaactctagaacaacgctggcaagcggcc
gaacaccagcagcgcgatcgccaagccctcgcccagcagattcagcagctccaaacgcag
ctaggcgatcagcaacgcctcctagccgaaaatcaacagcgacaggcccaagcccagcac
attttgagccgcgccctcagcatccgagccgaatggcaacagtggcagcagagccagcaa
caggctagccgctgggcacagcagactgaggctcagcaagccctgagtgaacaactgcag
caggtccaacgtcagtacgatgccgccgtccggcagcaccagcaggcgatcgctaccgtt
cagcaacagcttcaagctggacaggaggcgctagtgcagttcgagccgctgctccagcag
gccaccgcgatcgcggcaggctaccaacaactacaacaagctcggcaagaattggcccaa
gcccagcaacgacacaccgcggctcaacccctgctggcccagcggcaacaggtgcaaacc
cagctaggacaagcgcgcctgcggctgcaagcccacctcgaagacctgcagggacaacgc
ctgcaactgcggcaacagcaccgcgatcgcggcgaactggaacaggcactggctagcgtt
agccagacgatcacccaactcgagcagcaccagcattaccgcaatcaagtgcaggagaag
caacaggagcgcagcaattttctggcgcggctgcaagctcgacaacgggactatgaggca
cagctggcggaactggaatcccaagcccgcgcgatcgccccccacggtacttgtccactc
tgcgatcaggccctcgatcccgaccattggcaacacctgcagcagcgctaccaacaacag
cagactgagattcaaaacctgatctgggtgatctgcgaacaatttgccgtttccgagcgg
gaaattcaggtcctgcggcaggaatatcgcgatcgcgccgtcgatctggagccctacagc
caagccctcgaagaacgaggcaaactgcaagctcagctagtcgcccacgatgaacaaacc
caacagctgcagcaactcgatcagcagattcaaacgctagaacggagcctcgccgccggc
gattttgcaccagatctgcaacggcgggtgcggcagctcgatcgccagattcaggagcta
ggctaccgcgatcgcgacctcaatttggcgcagcagaccgttgaccagtggcaggcaatt
gccgagcgctatgccgccttgcaagcggcccaggcccagcagcagcgctgggatcaggag
cgccctcgcctcgaaacgcaactgcgggacctgcaacaagccttgaaccatctctcagac
agtcccctcggccagcaccgccagcaactacagcgtcagctccagcaggtggaggccagt
ctacgtggcctgaccgatccgcaagccgccccacctcaagctgaggttgccgaacgctac
caagcactcctgcaagctgaacaggccatgcctcgccttcaagcagaacaagctgattta
gaggcgcaggttcagcaactgcagaaaatcttgaccgccagtctggcccaacaagctgcg
atcgccactgccgaggatcgccagccgttgcagcaagcgatcgcagactgccaagcccag
ctacaagcaatccaagcggcacagacaaacctggagcaggcaatcgcccaactaccgccc
agccgcaatcttgaggcgatccacgcccaaattgcccgtctagacgagcagttgcaacag
attcagcaggaacaacagcccgcccaacagctcgccacactcgtcgatcgcgctgatttc
acggttcccttgatgcgccaatggctgaggcatctccaactgcgctgccagcattggctc
gatcgctggggctgggagcaaggccagctgctctggcaagtcgtcagtcctgccagcggc
gcaccgggcgtgcagcttcgcctccagaccgatcagggcgatcgcagcatcaacacctgt
gcagacggagaagccgtgcttctggatctcgccattcggctcagcttagtgcagctcttg
gctcagcagcccgatcgttccagcaggttactgatccttgatgccccgtttagttcgctt
aatccgcaacaaaaaaacgccctgaccgcagcgctgacggaagaactagatcagggacta
atttgtgaggcagacagtagcgtgaaggcgatcgcggccgacacctggcacgtggtttta
cagaaccaggagtcgcagctcacagcactcagagaggccgcaaccggaacaggggctgat
taa
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