Synechococcus sp. CC9311: sync_0124
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Entry
sync_0124 CDS
T00390
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
syg
Synechococcus sp. CC9311
Pathway
syg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
sync_0124 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syg03400
]
sync_0124 (ruvB)
Enzymes [BR:
syg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
sync_0124 (ruvB)
DNA repair and recombination proteins [BR:
syg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
sync_0124 (ruvB)
RecFOR pathway proteins
sync_0124 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_25
Mg_chelatase
AAA_14
AAA_16
AAA_22
nSTAND3
TIP49
AAA_33
TsaE
AAA_18
DUF815
AAA_17
RNA_helicase
Rad17
AAA_24
AAA_28
NB-ARC
IstB_IS21
NACHT
bpMoxR
Sigma54_activ_2
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ABI46432
UniProt:
Q0IDW1
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All DBs
Position
131182..132261
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AA seq
359 aa
AA seq
DB search
MAIVSSNAEPSKGAPRPKPSRVVDAARQLDDSAELSATKEDGLRPRRLDDYIGQRELKQV
LGIAIQAAMGRGEALDHVLLYGPPGLGKTTMAMVLAEELGVTCRITSAPALERPRDIVGL
LVNLQPKEVLFIDEIHRLTRVAEELLYPAMEDRRLDLTVGKGSTARTRALELPPFTLVGA
TTRAGALSSPLRDRFGLIQRLEFYGQEDLQAIVMRAAGLLTLQLSPEACAEIARRCRGTP
RIANRLLRRVRDVACVREVSGCIDVKLVDEALTLHRVDGKGLDASDRRLLELLLQSHGGG
PVGLDTLAAALGEDPTTLEAVVEPYLLQLGFLQRTPRGRVVTAAGRGHLGWPADEGDAA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgtttcttccaacgctgaaccctccaagggagctcctcgaccgaagccgtcg
cgggtggtggatgcagcgcgtcaactggatgattcggcagagctgagcgcgacgaaggaa
gatggtctcaggcctcgccgtctcgacgattacatcggtcagcgcgaactcaagcaagtg
ctggggattgccatccaagcggcgatgggtcggggtgaggccctcgaccacgttttgctg
tatggccctccagggttgggtaaaaccaccatggcgatggtgttggctgaagagcttggg
gtgacctgtcggatcaccagcgctcctgcccttgaacgccctcgcgacattgttggcttg
ctcgtgaacctgcagccaaaagaggtgctctttattgatgagattcatcggcttacccgc
gttgcggaggagctcctctatccggcgatggaagaccgacgccttgatctcactgttggc
aaaggaagtacggcgcgaacaagagccctggagttgccgcccttcacgctggtgggagca
accacaagggctggtgcgctgagctctcccctgcgcgatcgctttggactgattcagcgc
ctggaattttatggacaagaagatctgcaagcgatcgtgatgcgggctgctggtctgttg
accctgcagctttcgcctgaggcttgcgcagagattgcccgacgctgtcgtggcactccc
cgcatcgctaaccgactcttgcgccgggtgcgtgatgtggcctgtgtgcgtgaggtgtcg
ggctgcatcgacgtgaagttggtggatgaagcgctcacgctgcatcgtgtggatggcaag
ggccttgatgccagtgaccggcgccttctggagctgttgcttcagtcccacggaggcggc
cccgttggtctcgatacgttggctgcggcgctcggtgaggaccccaccaccctggaagcc
gtggtggagccctatttgcttcagctcggctttctgcagcgcaccccccgtggacgggtg
gtgaccgcagctggtcgaggccatctcggttggcctgcggatgagggggatgcggcatga
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