Synechococcus sp. CC9311: sync_0228
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Entry
sync_0228 CDS
T00390
Name
(GenBank) polyA polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
syg
Synechococcus sp. CC9311
Pathway
syg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
sync_0228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syg03019
]
sync_0228
Enzymes [BR:
syg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
sync_0228
Messenger RNA biogenesis [BR:
syg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
sync_0228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ABI46306
UniProt:
Q0IDK8
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All DBs
Position
238263..239567
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AA seq
434 aa
AA seq
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MRVWGPKFSTRAWHRSSLLEAEGVERPGLPPQLLPALQALASEVGVSRLALVGGAVRDAL
LHDEHCDPWRELPDLDLVMEGSASELAAALQRHYGDERVQEVRVHGAYGTAELSFDGVLL
DLAGARQDHYPAPGENPVVESGSLERDLERRDFTVNAMALELSLSGDREPLLLDPHGGQA
HLERRELAFLHASSVADDPTRVIRAARYGARLGFVLTPSSQDQLRTTLKRWPWSWRHGQS
TEHVPPALGTRLRMELELLFENEPWLKALELLQQWGALALLDPLLSSNATLIRRLRWAMR
LKVPLILALVAAATDPCSLGQRLQLPLRQQRLLEESMSLTNWLHSEVLPQAWVGWSAVQW
TEALETRAWSPESVVLTVAMGVPCWRPMLRWWGRWRKIRSPLSAKDLIASGIPAGPGLGL
ALHQARVKALDSMR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtatggggcccaaaattctcgacccgcgcttggcaccgatcgagcctgctggag
gctgagggggtggagcgtccaggtcttccacctcagcttttaccggcacttcaggccctc
gcgtcagaagttggagtgtcccggttggctctcgtgggcggtgctgtgcgagatgccttg
ttgcacgatgagcactgcgatccatggcgagaattgccggatctggatttggtgatggag
gggtcggcctctgagttggcggctgctcttcagcggcactacggagatgagcgggtccag
gaggtgcgtgttcatggtgcctatggcacagctgagctgtccttcgatggcgtgttgctc
gatctagcgggcgcgaggcaagaccactacccggcaccgggcgaaaaccctgtggtggag
agtggctccttggagcgcgatttggagcgtcgggatttcacggtgaatgcgatggccttg
gagttgtcgctttctggcgatcgtgaaccattgcttttggacccgcacggcggtcaagcc
catcttgagcgccgtgaacttgccttcttgcatgcgtccagcgttgctgatgaccccacg
cgggttattcgtgctgctcgctatggggctcgactggggtttgtgttaacaccaagctct
caggaccaactgcgcacaaccttgaaacgttggccttggtcttggcggcatggccaatca
accgaacatgttccccctgcattaggcacacgcttgcggatggaattggagttgctgttt
gagaatgaaccgtggctaaaagctttggagctactgcagcaatggggagcattagcccta
ctcgatccgcttctgtcctcgaacgcgacgctcatccgtcgcttgcgttgggcgatgagg
ttgaaagtgccattgatattggctctggtggctgctgctactgacccttgctcgctagga
cagcgtctgcagcttccgcttcgtcagcagcgcttgttggaggaatcgatgtccttgaca
aactggttgcactcagaagtgttgccacaagcatgggttggctggagcgcagttcagtgg
acggaagctttggagactcgagcttggtcacctgagtcagttgtcttaactgtggcaatg
ggcgtgccatgttggcgcccgatgttgcgttggtgggggcgctggcgaaagatccgatcg
ccactgagtgcaaaagatttgatcgcaagcggcatacccgctggaccaggtcttggatta
gcccttcatcaggccagagtgaaggcgcttgactctatgagatga
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