Synechococcus sp. CC9311: sync_0252
Help
Entry
sync_0252 CDS
T00390
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
syg
Synechococcus sp. CC9311
Brite
KEGG Orthology (KO) [BR:
syg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syg03400
]
sync_0252 (phrB)
Enzymes [BR:
syg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
sync_0252 (phrB)
DNA repair and recombination proteins [BR:
syg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
sync_0252 (phrB)
Prokaryotic type
sync_0252 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABI46348
LinkDB
All DBs
Position
259523..261001
Genome browser
AA seq
492 aa
AA seq
DB search
MTASRVLFWHRRDLRLADNLGLQAAEAISPAVTGVYVLDPALIQPPESLPPMAPARLWFL
VESLRELQQRWRDVGSRLLVVAGDPVQLLPRLASLLEAPAVVWSRDVEPYARERDRQVAK
ALQADGCKVLVDWDQLLLAPDLIKTGGGDPYRVFGPFLRNWRGQVERSGPSTVDPPRALI
DLEAEMLEAVLGGEGALGRLCTEGQRQLEQLQVEHGFRGTDLCPSRPGEAAAAAQLAAFA
DGALLAYEPDRNFPGMPGTSYLSAGLSVGTVSPRQAWCAAQGVKEIARSDEQQQAITVWE
QELCWREFYQQALFHFPELADGPYREQWRRFPWENNSDWFEAWREGQTGMPIIDAAMRQL
NQSGWMHNRCRMIVASFLVKDLICDWRWGERAFMELEVDGDLAANNGGWQWSASSGMDPK
PLRIFNPATQATKFDAEGEYIREWVPELRHVNTKDLISGEIPALERRSYPEQLINHKVQQ
AKFKALYATIRS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgtctcgcgttttgttttggcatcgccgcgacctgcgattggccgacaatctc
ggtttgcaggcggctgaggcgatcagtcctgcggtaactggcgtatatgttctggatcca
gctctgatccaaccacctgagtcgttgccgccgatggctccagctcggctttggttcctg
gtggaaagcctgcgcgaacttcagcagcgctggcgtgatgtgggaagtcgtttgcttgtg
gtggccggcgatccggtgcagctgctgccgcgtttggcgtcgttactagaggcgccggcg
gtggtctggagccgggatgtggagccttatgcacgggaacgcgaccgtcaggtggccaaa
gcactgcaagcggatgggtgcaaggtgttagtggattgggatcagctgctgctggcaccg
gatttgatcaaaaccggcggtggtgatccgtatcgcgtgtttggccctttcctgcgcaat
tggcgcgggcaggtggagcgcagtgggccaagcacggtggaccctcccagggccttgatc
gatctggaggccgagatgctggaagctgttctcggaggtgaaggtgcgctgggccgtttg
tgcactgaggggcagcgtcagctggagcagttgcaggttgagcacggttttcgtggcacg
gacctgtgccccagtcgtccaggagaggccgcggctgctgcgcagttagccgcctttgcg
gacggggcattgctggcctatgaacccgatcgtaattttccggggatgccaggaacgtct
tatctcagtgcgggattgagtgtgggtacggtcagtccccgtcaggcctggtgtgctgcg
caaggagtcaaggagatcgcccgtagtgatgagcaacagcaggcgatcacggtatgggaa
caggaactctgctggcgtgagttttaccagcaggccttgttccatttcccagaactggcg
gatggtccttaccgcgagcagtggcggcgttttccttgggaaaacaacagcgactggttt
gaggcttggagggaaggacaaacggggatgccgatcatcgatgcggcgatgcgacagctc
aaccaaagcggctggatgcataaccgttgccgcatgatcgtggcctcattccttgtgaag
gatttgatctgtgattggcgttggggcgaacgcgccttcatggagttggaggtggatgga
gatttggccgctaacaatggtggctggcaatggagcgccagcagtggcatggatccaaag
cctttgcggatatttaatccggccactcaggcgacgaaatttgatgccgagggtgagtac
atccgtgaatgggttcctgaattgcggcacgtcaacacgaaggatttgatcagtggtgag
atccctgctttagagcgcaggagctatccggagcagctgattaatcacaaagtgcagcag
gccaagttcaaggcgctttacgccaccatccgctcttga
DBGET
integrated database retrieval system
