Synechococcus sp. CC9311: sync_0471
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Entry
sync_0471 CDS
T00390
Name
(GenBank) 3'-5' exonuclease family protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
syg
Synechococcus sp. CC9311
Brite
KEGG Orthology (KO) [BR:
syg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syg03016
]
sync_0471
Enzymes [BR:
syg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
sync_0471
Transfer RNA biogenesis [BR:
syg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
sync_0471
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABI47566
UniProt:
Q0ICX3
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All DBs
Position
468387..469031
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AA seq
214 aa
AA seq
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MTDISAQPRAFAVFDGDLDADWAERYSHATALAVDTEAMGLIHGRDRLCLVQICDAEDQV
SCVRIALGQTEAPRLKELMERASIEKVFHFARFDVAALATGLGIRVNPIFCTKVGSRLAR
TYSPRHGLKEVVMELVGVELDKQAQSSDWGRVDELSETQLAYAANDARYLLPARDRLKEM
LQREGRWELAERCFECIPVMSDLDRFRFNQTFEH
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatctccgcacagcctcgagcgtttgctgtttttgatggcgatcttgatgcg
gactgggcggagcgctacagccatgccaccgctctcgctgtggatacggaagccatgggc
ttgattcatggaagggatcgtctctgcctggttcaaatctgtgatgctgaagatcaggtg
tcctgcgttcgcatcgctctggggcaaaccgaggctccacgtcttaaagaattgatggag
cgggcctctattgagaaggtgttccatttcgcccgctttgatgttgcggcacttgccacc
gggctggggatcagggtgaaccccattttctgcacgaaggtggggagccgattagcccgc
acctacagccctcggcatggactcaaagaggtggtgatggagttggtgggtgtggagctg
gataagcaggctcaaagcagtgattgggggcgtgtggatgaactcagcgagacacaactc
gcctatgcggctaacgatgcgcgctacctactgcccgccagagaccgcctgaaggagatg
ttgcagcgtgaggggcgttgggagcttgccgagcgttgctttgagtgcattccggtgatg
tccgatctcgatcgcttccgctttaaccagacgtttgaacattga
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