Synechococcus sp. CC9311: sync_0485
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Entry
sync_0485 CDS
T00390
Symbol
cpcF
Name
(GenBank) phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit
KO
K02289
phycocyanobilin lyase subunit beta [EC:
4.4.1.32
]
Organism
syg
Synechococcus sp. CC9311
Pathway
syg00196
Photosynthesis - antenna proteins
syg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syg00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
sync_0485 (cpcF)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
syg00194
]
sync_0485 (cpcF)
Enzymes [BR:
syg01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
sync_0485 (cpcF)
Photosynthesis proteins [BR:
syg00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
sync_0485 (cpcF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
HEAT
Cnd1
Adaptin_N
Motif
Other DBs
NCBI-ProteinID:
ABI45480
UniProt:
Q0ICW0
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All DBs
Position
complement(478499..479128)
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AA seq
209 aa
AA seq
DB search
MTNVSPLEGAIADLQAAKTTPELIRATKNLCNLRTIEAISTLIEVLGFNNPAVASVATAG
LIELGSQAVPSLLVSLDEKNYGSRAWVVRALASIRDPRSLDLLEHALATDIAPSVRRSAA
RGLAELNLIYPEDSSKLNRCLLALLAAIKDDEWVVRYSAIFGIELHLLKYNSTYKNLCIL
GLKQLSSNSESIKVIRLRATLALQRLNPS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaatgtctctccactagaaggagcgatcgctgatcttcaagcggctaaaacaaca
cctgaattaattcgagccaccaaaaacctatgcaatctccgtacgattgaagcaatttca
acactgattgaggtgctgggatttaacaatccagcagttgcatcagttgcaactgctgga
ttaatcgaacttggcagccaggctgtgccctcactattagttagccttgacgaaaaaaat
tatggttcacgtgcctgggttgtacgagccctggcatcgattcgtgaccctagaagcctc
gacttacttgaacatgctttagccacagatattgcaccgagtgtgcggcgctcggccgct
cgtggcctggcagagctaaatctcatttaccccgaagacagttcaaagctcaatcgctgt
ctattagcactactcgcagccattaaagacgatgaatgggttgtgcgctattcagcaatc
ttcggaattgaactgcacttactcaagtacaattctacatataaaaatctatgcatcttg
ggtttaaaacaacttagctccaattctgagtccattaaggtgattcgcctgcgcgccacc
cttgctttacagcgcttgaatccctcatga
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