Synechococcus sp. CC9311: sync_1054
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Entry
sync_1054 CDS
T00390
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
syg
Synechococcus sp. CC9311
Pathway
syg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
sync_1054 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syg03400
]
sync_1054 (recB)
Enzymes [BR:
syg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
sync_1054 (recB)
DNA repair and recombination proteins [BR:
syg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
sync_1054 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
AAA_25
ResIII
Death
Motif
Other DBs
NCBI-ProteinID:
ABI46611
CyanoBase:
sync_1054
UniProt:
Q0IBA6
LinkDB
All DBs
Position
complement(959333..962971)
Genome browser
AA seq
1212 aa
AA seq
DB search
MSSRFQPNHYPLDAGIRLLEASAGTGKTFALAHLVLRLVTERKLNLKELLVVTFTESAAA
ELRDRIGRRLNDALQALLQNQTNNSNSQTDSSPTDAVMEEWLILHGQDPNTRRTIASNLL
EALEGLERADITTIHGFCRRSLRRQALQNGTAMEVCLENDSQHLSQEVAYDYWEHQVLAL
PASDVSGLLHAGLSADQLSHALSRLDSDCAVRIAGTEGSDHLEGPLIECFDQWLQSSWTA
FEAEWNTNGRTLETAFRDCATDWRSQGQTDTKPYSPKPKKDRANELSAWISQQNSTQPFR
ISYGDVRNQSLLGDYFHPGCFSKTARRCNEIHPNLPQPTLQKAIAALWDGPAEKVWRHAL
THGLQTLAARRAQQGVISFSGLLDALDPQATDAEPKRWLVPIQRRYRVALIDEFQDTDPL
QWRLLQACFATPNHLLLMVGDPKQAIYRFRGGDLNTYKQARQQADQIDNLLDNRRTTPSL
MEAMNQWMAPGLKRSKLEVPRVTPCATALPLELPDGEQPLQLIDLQADDSDSPPTRTALE
STIPPLVACQALHLLDSDPSLTPSDLCVLVSRHRQAEAVREQLAQRGLPSRLVSPGDVLS
TTGAAELQHLLDALTTPADGGRLRRLACSALMQWTSHQLQDAETNGDLDRLAGQLRNLQD
DLPFLGLLGCLSQLLEGRMLADLSSRGRLLGDIQQCARLVQDAMHRQGLDLGSAADWLRR
QRLQPIEPTPDNRQPHSDLAESAVAVVTVHRSKGLQYPVVICPYLWQAPADGKGPLWRNP
PNDPEGTWQVALNPHWGHGHKAAERNQDDSAAEAERLAYVALTRAERHLVVFWVAAAGQD
ANPLANWVKELSMRDKPLASRHLPPETTTLPFWRPAPRIETLQLSDVPQRTLDRSWGRSS
YSAWISTQNGHHKPAPADPRNLEEGRDIDAVADTEAPESPANTADQNGPLADFPKGPGAG
DCLHRILEQVSFQGPADQAPNQAVVAEEIGRAGIDLEYCDAVITALNTVLKAPLGGPLKD
LKLSDLSAGRRLHELSFDLPVAQRGKPVNSAGLAHAFEADSDHRFGQHYAQSLRQLDIRS
RGFLTGSIDLVFTDGENPATARWWVADWKSNWIGERDDSGRGVACGPRHYSQAAMEEQML
SHHYPLQAHLYLLALDRYLRWRLDGYDPERHLGGYAYVFLRGINPEGGSGVVIEPAPLKR
IRRLDQWLEGLS
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccggtttcaacccaatcactacccccttgatgccggaattcgtctcctcgaa
gccagtgctggaacgggcaaaacctttgctttagcccacctggtcttacggctagtcaca
gagcggaagctaaatctcaaagagcttttagttgtcaccttcacagaatccgccgcggcg
gaattgcgtgatcgaattggtcgtcgtctcaacgacgcactacaagcgcttctccaaaac
caaaccaacaactccaactcccaaaccgactcctcacccacagatgcagtgatggaggag
tggctaatactccacgggcaagatcccaatacccgtcgcacgatcgccagcaacctttta
gaagcacttgaagggctggaacgtgccgacatcaccaccatccatggcttctgccggcgc
agccttcgccgacaagctctccagaacggcacggcaatggaggtctgtcttgaaaatgac
agccagcatttgtcccaagaggtggcttacgactactgggaacaccaagtattggccctt
cctgcgagcgacgtctcagggctgttgcatgccggcctctcagctgatcagttaagccat
gccctcagtcgcttagacagcgattgcgcagttcggatcgccggcactgaaggatcagac
cacctagagggtcccttgatcgagtgctttgaccagtggctgcaatcgagctggactgcg
ttcgaagcggaatggaacacaaacggacgaacgctggaaacggcctttcgcgactgcgca
acggattggcgaagccaaggccaaaccgacaccaagccctactcaccgaaaccgaaaaaa
gatcgcgcgaacgaacttagcgcctggatatcccaacaaaatagcacgcagccgtttcgc
attagttacggagacgtgcgaaatcagagcctacttggtgactacttccatcccggatgt
ttcagcaaaacagctcgccgctgcaacgaaatccatccaaaccttccacaaccaaccctg
caaaaagccattgccgctctgtgggatggaccagctgaaaaggtttggcgccatgcgctc
acccacggactccagaccctggccgcccgccgtgctcaacagggggtcatcagcttttct
ggcttgctcgatgccctagatccccaagcgacagatgctgaaccgaaacgctggctggtc
ccaattcaacggcgctatcgcgtcgctctgatcgacgaatttcaagacacggatccactg
cagtggcgcctgctccaggcctgctttgcgacgccaaaccatctcttgctgatggtgggt
gatcccaagcaagcgatctaccgctttcgaggaggagatctcaacacctacaagcaagcc
cggcaacaagctgatcaaatcgacaatctgctcgacaacaggcgtacaactccgtctctg
atggaggcgatgaaccaatggatggcaccaggcctcaagcggtcaaagctcgaggtgccg
cgtgttacaccctgtgccaccgcccttcccttggagctcccggatggtgagcagcctctc
caactcatcgatttacaagccgatgactccgactcaccccccacacgaacagcactcgaa
tcgaccattccgcccctggtcgcgtgccaagccctccacctgctcgacagcgatccatct
ctgaccccatcggatctgtgcgttcttgtcagccgtcatcgacaagccgaagcggtacga
gaacagctcgctcaaagaggcctacccagccgcctcgtgagtcctggagatgttctcagc
accaccggcgcggctgagttgcaacatcttcttgatgccctcaccacacccgccgatggc
ggacgattgcgacgactcgcctgttctgccctgatgcaatggacaagccatcaattgcag
gacgcagaaaccaacggtgatctcgaccgactcgcagggcaactccgcaacctgcaggac
gacctccctttcctgggtttgctcggctgcttgtcccaactcctcgagggccgaatgctc
gctgatctctcgagccgcgggcgcttgttaggtgacatccagcaatgtgcacgactggtg
caagacgccatgcatcgacaaggcctcgacctgggcagcgccgcagattggttgagacga
cagcgcttacaaccaatcgaacccacccctgacaacaggcagccccacagcgatttagcg
gaaagcgcggtggccgttgtcaccgtgcaccgaagcaaaggcctgcagtacccagtggtg
atctgcccctatttgtggcaagcaccagctgatggcaaaggccctctttggcgtaacccg
cccaacgacccagagggaacctggcaagttgcgctcaacccccattggggccatggacat
aaagccgcggaacgaaaccaagacgacagtgctgcagaagcagagcgactggcctatgtg
gccttaacccgcgcggagcgccatctcgtggtcttttgggtcgccgctgcgggacaggat
gccaatcctctagcgaactgggtcaaggagctttccatgcgcgacaaacccctcgcaagt
cgccacttaccaccagagaccacaaccctgcccttctggcgtccagctccgaggattgag
accttgcagttgtcggacgttcctcaacgcactctcgaccgcagctggggtcgaagcagc
tactccgcttggatctccactcagaacggacatcacaagccagccccagctgatccacgc
aacctcgaagaagggcgcgatattgatgctgtagccgatacggaagctcccgaaagccca
gcgaatacagccgatcaaaatggccctcttgcagattttccaaaaggtccgggtgcgggc
gattgcctgcacagaatccttgaacaggtgagctttcaaggtcctgcagaccaagctcct
aatcaggctgtagtggctgaagagattggccgagccggaatcgacctcgaatactgcgat
gccgtgatcacagcgctcaatactgtgctgaaggcacccctaggcggccctctcaaagac
ctgaaactgtccgatttgagcgctgggcggcgtcttcatgagctcagctttgacctaccc
gttgcccagcgaggcaaaccagtgaactcagcaggtttagcccatgcctttgaagcagac
agcgaccatcgctttggtcagcactacgcacaaagtttgcgccagctcgacattcgcagt
cgggggtttttaaccggatcgatcgatctggtgttcaccgatggagagaatcccgccaca
gcgcggtggtgggtggctgattggaaaagcaattggattggtgaacgggacgactctggc
cggggcgtcgcctgcggaccgcggcactacagccaagccgcgatggaggagcaaatgctc
tcccatcactatccgctccaggcccatctctatcttttggccctggatcgctatctgcgc
tggaggctcgatggatacgaccccgaacggcatctcggcggctacgcctatgtgtttttg
aggggcatcaaccccgaaggaggctcaggcgtagtgatcgagccggcacctttaaagcga
atccgccggctggaccaatggcttgaggggttgtcgtaa
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integrated database retrieval system
