Synechococcus sp. CC9311: sync_1055
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Entry
sync_1055 CDS
T00390
Symbol
recC
Name
(GenBank) possible exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
syg
Synechococcus sp. CC9311
Pathway
syg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
sync_1055 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syg03400
]
sync_1055 (recC)
Enzymes [BR:
syg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
sync_1055 (recC)
DNA repair and recombination proteins [BR:
syg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
sync_1055 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Foamy_virus_ENV
Motif
Other DBs
NCBI-ProteinID:
ABI45995
UniProt:
Q0IBA5
LinkDB
All DBs
Position
complement(962968..966264)
Genome browser
AA seq
1098 aa
AA seq
DB search
MLTVYRSNRTEFLASLLAQTLTLDPPGPFEELEIVVNTWPTSRWLGEQLAKANGISALVR
FPFPGSRLRQLVRCILDLDPTSEDPWRAERLVWSVLKVLPGLLDHPSAESLKLWWEQHVS
VSGRLNRDHWQLARCLADAVDDYALYRPQELSQWMKGHGDADLPAHLLWQPELVRALAAL
LPCEPFGLQVQKAVQQLRNGDVSATALPPRLRLFGISNLAPVQVELLQGLSGLMAIELYL
LTPCPELWQRSEQRRQTLGPAWNTPPDGPWLLESPRLEAILGRMGAEFQLLLEGNGDCFL
GQWDQGDLFAAPIQIAASEQRPATLLEQVQQQLVDGSAPTLTPVDHDSSLRFLACAGPWR
EVQLVRDQILQWLASDPSLEPRDVLVMTPDVERYAPLLTSVFGDHDATGVNIPWRLTDRS
QQSTPGLSQGFMALLRLASERLTASGLEGLLANPALQVLQGITATDAVRITECLQQTGFR
WGVDGKERGGDDTHSLRWCLDRWLLGLILPAEPGLAPGGCAPFQGGLTIQQLEEWWPLLD
GLAQWIIRLRQPHSPSAWTTQLNQLLKHLYGDGGDWAWEQQAIVEALDTMQQQASECTLD
LDLTVVVSILDEALSADSGRFGHRSGALTISALEPMRAIPHRLIVLMGLDSQGFPRQQER
PGFHLLEQQRRLGDPSSTDQDRYVLLEALMSARQHLLISWNARDERKGEELPPAPPVQQW
LTLLKEQLTPEQFERVVLEQPANPLDPRNFLANSSGSVFSSDRHHLDARLNLDRRDHDRW
SKNSLGLAHPLSWTPVTASGCLDSDAVSRWLEAPQRYWLKARGLETREWSTPVEDLSALE
LEERERQSFLNQSFLNQLDWLASDSSLIWKHALPGEWSQQLRGQGMLPPGAAGQLAANRL
EQRWQNLQQTLLQLGPLHCDLIRSETESRTLLRAGATTVWVSAGRLQSRTALGGWLTHLI
QQASGVPTPTAVICRCDSSAKADHFQLALHWQPLDSDKAQELLFSLHALAAAGAESCWPV
PPASGLARALMLHKGLDKANRAFESRWDGGFAGMGERERAEMQLCFGNHFEANNFLTEAC
FEEAFQALYAPMLEAQRA
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
ttgctaacggtctaccgcagcaatcgcacagagtttctggcatcgcttctggcacagacg
ctgacgcttgaccccccaggtccgtttgaggagttggagattgtggtcaacacttggccc
acaagccgatggctcggcgagcagcttgccaaagccaacggcatcagcgctcttgtgcgt
tttccctttcctggatcgcgcttacgtcaattggtgcgctgcattttggatctcgatcca
acgagcgaagatccttggcgcgcagagcgactggtttggtctgtactcaaggtgctcccc
gggcttctcgaccatccctccgctgaaagcctgaaactctggtgggagcaacacgtcagc
gtttctggacggctcaatcgtgatcattggcagcttgcccgctgcctcgccgatgctgtg
gatgactatgccctttaccgaccacaggaactgagccaatggatgaagggccatggagac
gctgacctaccggctcatttgctctggcaacctgagctcgttcgggcccttgcagcactc
ctgccctgtgagccctttggtcttcaggtacagaaagccgttcaacagctgaggaacggt
gatgtttcagcaaccgcattaccacctcggttgcgcctctttggcatcagtaatctcgct
ccagtacaggtggaactccttcagggcctctcgggcctgatggcaatcgagctttatctg
ctcacaccttgtccagagctgtggcaacgctcagaacaaaggcgacaaacgctcggacca
gcatggaacactccgccagatggcccctggcttttggaatcgccaagacttgaggcgatt
ttggggcgcatgggggctgagtttcagttgctcttggaaggcaacggcgattgctttctc
ggccaatgggatcagggagatctcttcgccgcgccgattcagatcgcggcatccgaacag
cgaccagccacgctcctggagcaggtgcaacaacagctagtagacggaagcgcaccgacg
ctcacccctgttgatcacgacagctcattgcgctttttggcctgcgcaggaccgtggcga
gaggtgcagctggttcgcgatcagatcctgcaatggctggcctctgatccaagccttgag
ccacgagatgtcttggtgatgactcccgatgtggagcgctatgcaccgctcctcacctcc
gtcttcggtgatcacgacgccactggagtcaatattccctggcggctcaccgatcgaagt
cagcagagcactccaggtctgagccaagggtttatggcccttttaaggctggccagtgaa
cgcttaacggcatccggtctcgaaggacttctggccaaccccgccctgcaagtccttcaa
ggcatcacggccacggatgccgtgcgaatcaccgaatgcctccagcagaccggcttccgt
tggggggtggatggcaaggagcgaggaggcgatgacacccatagcctccgctggtgtctt
gatcgctggctgcttggcctaatcctgccagccgagccaggtcttgctcctggaggctgt
gcccccttccagggaggtctcaccattcagcagcttgaagaatggtggccactactggat
ggactagcgcaatggatcattcgtttacgtcaaccccacagtcccagtgcttggaccaca
cagttaaatcagcttctcaaacatctctatggcgatggaggtgactgggcctgggagcaa
caagcgatcgtcgaagcactcgacacgatgcagcaacaggcatctgagtgcactcttgac
cttgatctcaccgtcgtggtctccattcttgatgaggccctctccgcagatagcggtcgc
tttggccaccgcagtggcgctcttacgatcagcgccctagagccgatgcgagccattccc
catcgactcatcgtgctgatgggacttgattcgcaaggctttccacgtcagcaggaacgc
cctggctttcacctcctggaacagcagcgacgtctaggcgatccatccagcacagatcaa
gaccgttacgtgctgttggaggccttgatgtccgcccgacaacatcttcttattagctgg
aatgcacgcgatgaacgcaagggcgaagagcttccccccgcgcctccagttcaacaatgg
ctcaccttgctgaaggagcaactcacacccgaacaattcgagcgcgtggtgttggagcaa
ccagccaatcccttggatcctcgcaattttctcgccaatagctccggctcagtcttcagt
tctgaccgccaccacctggacgccagactcaatctggatcgccgcgatcacgatcgctgg
agcaaaaactcccttggcctagcccatcctctgagctggactccagttacagcctctggc
tgtttggattcagacgccgtaagccgttggcttgaagctccccagcgctattggctcaaa
gcgcggggattggaaacacgggagtggtccacccccgtggaagatctctcagcgctggaa
ctggaggaaagggagcgtcaatcctttctgaaccagtccttcctcaatcaactcgactgg
ctcgctagcgattcgagcttgatctggaaacacgctcttccgggggaatggagccaacag
cttcgaggccaaggaatgcttccgcctggcgcagcaggccaactggcggccaatcgcctc
gagcagcgctggcaaaatctgcaacaaaccctcttgcaactcgggcctctgcactgtgat
ttgatccgctcagagaccgagtcacgcaccttgctcagggctggagcaaccacggtttgg
gtcagcgcaggccggcttcagtcgcgcactgcacttggcggatggttgacccacctcatc
cagcaagcgtcgggagtgcccaccccaacggctgtgatctgtcgatgtgacagcagcgcc
aaagctgatcactttcaacttgcccttcactggcaaccgttggattcagacaaagctcag
gagcttctcttttccctccacgctctagcggccgctggagctgaatcgtgctggccggtg
ccacctgccagcgggttggccagagcactcatgttgcacaaaggtcttgacaaagcgaac
cgagcgtttgaaagccgttgggatggtggattcgcaggcatgggggagcgggagcgtgca
gagatgcagctttgttttggcaaccacttcgaagcgaacaattttttaacagaggcctgc
tttgaggaggcttttcaagcgttgtatgcgccgatgctggaggcgcaacgagcatga
DBGET
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