Synechococcus sp. CC9311: sync_1315
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Entry
sync_1315 CDS
T00390
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
syg
Synechococcus sp. CC9311
Pathway
syg03410
Base excision repair
syg03430
Mismatch repair
syg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
sync_1315 (recJ)
03430 Mismatch repair
sync_1315 (recJ)
03440 Homologous recombination
sync_1315 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syg03400
]
sync_1315 (recJ)
DNA repair and recombination proteins [BR:
syg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
sync_1315 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
sync_1315 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
sync_1315 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
ABI47157
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All DBs
Position
complement(1193536..1195431)
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AA seq
631 aa
AA seq
DB search
MPSAVSVQQWQLPRGIDLTALDSVPLPLPLRALLFRRGLTEPAQVNALLNDSALPKPGGH
FPELEKAVQRLHQACLKAERVAICGDYDADGMTSTALLLRTLRTLGAEPQAAIPSRMADG
YGLNCSMVNELHDAGVRLIVTVDNGVAAHEALSRAEDLGMEVVLTDHHTLPKTRPKALAL
IHPATTPDHSPYRGLAGVGLAYVVARELAERMRQPAAIASARDLFCIGTVADMAPLTGAN
RTLLREGLLHLHRSNCPGVRALQQLAGLGDRPLRADDIGFQLAPRINAVGRIGDPQLVVD
LLTADDQNSAIELGRQCDSLNRQRRELCDAIEAEALALLESDRDPLPPFLLLAQGHWHHG
VIGIVAARLMDRFQRPTALLAADGDGLMRASVRAPEGFAVDKALDHCTDLLERHGGHPAA
GGFTVKAAQVHRLHEELNALALSWIQTRGEGILVEPEALLSLTAINHELWSALLSLEPFG
IGHPAPLFWSRGCKVTSQRLLRGGHLKLTLVQDNCEREAIAWRWQQTQPLPAIVDVAFRI
SLNRWQGEAKLQLEIQALREHHACLDLHRGLGVYRCSSPSASTVEIRNPSGERLSGSVNS
NGVFESEDNRARHPYVADLIQDACIGLGLLP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
ttgccgtctgccgtgtccgttcagcaatggcaactaccaagaggaatagacctcactgct
ttggattcggttccactccctttgcccctccgtgcactgctgttccgccgtggtctgaca
gagccggctcaagtgaatgcacttctgaatgattcagccctaccaaagcctggtggccac
ttccctgaattggaaaaagccgtccaacgtttgcatcaggcttgtttgaaggcagagcgc
gttgcgatctgtggcgactacgacgccgatggcatgaccagcacagcgttgttgctgcgc
accttgcgtaccttgggggcggaaccccaggcagcgattccaagccgcatggctgatggc
tacggcttgaactgttcgatggtgaatgagctccacgacgctggagtgcgcctgattgtc
actgtcgacaacggagtggctgctcacgaggccctgagcagagctgaagatttgggcatg
gaggtggtactgaccgatcaccacacgctcccaaagacacgccccaaagctctcgctttg
attcatccggccaccacgccggaccactctccctatcgcgggttagcaggcgttgggctc
gcctatgtcgtcgcgcgagaactcgcagaacgcatgcgccaaccagccgccatcgccagt
gctcgtgatttgttttgcattggcacggtggccgatatggcaccgctgacaggcgccaat
aggactctcctgcgagaagggttgcttcatctccatcgaagtaactgtccgggggtgcgc
gccttacaacaactcgcaggactcggcgatcgtcccctgcgcgccgatgacatcggtttt
caactggcccccagaattaacgcggtagggcggatcggcgatccccagttggtagtggat
ttgctcaccgctgacgaccaaaacagcgccattgagctgggtcgtcaatgcgacagtctc
aaccgacagcggcgggagctgtgcgatgccattgaggccgaagcattggccttattggag
tctgaccgtgatcctttaccaccctttctacttctcgcacaaggccactggcatcacggc
gtgattggcatcgttgcagcacgtctgatggaccgatttcaacgcccaaccgccttgctg
gctgctgatggcgatggtctgatgcgagcctctgtacgggctcccgaaggattcgccgtc
gacaaagcactcgaccactgcacagaccttcttgaacgccatggcggccacccagccgca
ggaggatttacggtaaaggccgcgcaagtgcatcgcctacatgaggagctgaatgcctta
gctctgtcctggatccaaacgcgcggagagggaattctggtggaaccagaagcactttta
tcactcactgcgatcaatcacgaactctggtctgcgttgctctctcttgaaccctttggg
atcggccatccagcgccactgttttggtcgagaggttgcaaggtgacatcacaacgattg
ctccgtggcggtcacctgaaactcaccttggtgcaagacaactgtgagagagaagccatt
gcttggcgctggcaacaaactcaaccactgccagccatcgtggatgttgcgtttcgaatc
agcctcaaccgctggcaaggagaagcaaaactgcagctcgaaatccaagctctaagagaa
catcacgcctgcttagatctccaccgcggccttggggtttatcgctgctcgagcccctcc
gcctcaaccgtagagattcggaacccctctggagagcgactgtctggatcggtcaacagc
aatggagttttcgaaagtgaagacaacagggcaagacacccttacgttgctgacctcatt
caagacgcttgcattggcctcggcctcctgccatga
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