Synechococcus sp. CC9311: sync_1472
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Entry
sync_1472 CDS
T00390
Name
(GenBank) possible transcriptional regulator protein
Organism
syg
Synechococcus sp. CC9311
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Gene cluster
GFIT
Motif
Pfam:
Fer4_5
Sigma54_activ_2
Sigma54_activat
Fer4
Fer4_10
Fer4_21
Fer4_6
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
ABI45203
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Position
1355739..1357937
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AA seq
732 aa
AA seq
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MQGSNSISYFDSTHQTIEFFRDLRSKAHTEHTGGVLFCHKKSVTGTPLHPLQQLAPYIVG
RVRRGVVGSSRYACKLREAIRGAASDSERRPVLIYGEPGLEKDNIASLIHFGSPDRKHFM
LRLDGALLKPDGSDIFGSQGDPSKPSLLKQLGHGSLLIDQLERVPEQLKSRLLELAEGKV
DIQVRLIFTSETVSPGFDRCCTLIRVPPLRVRRQDLGEWLRYGVRQRSSILGWAQAPLVP
EAVVKQLQAYDFPNNLRELETLIQQALQQMEQEGQAAPNVIPEVVFWTPTKQQLYRFDIW
RWKPKLRELMRSQSLWNGLLFGIVSWLFVLVNLWLWLGPQDRAHNGALNLFWAWWWPLIL
LSYPFVGRLWCSFCPFMVWGEIVQRSARRLGWQPNRWPRSQSDTWASPVLAAGFSVILIW
EEVWNLQNTAWLSSCLLLVITTGAVISSLHFEKRFWCRYLCPIGGMNGLFAKLSVLELRA
KAGTCSGSCSSYACFKGGPSEGDGFATEGCPLGTHPAHLQDNRNCVLCLTCAQACPHQSV
QISVRPPAADIQRTMQFPSGEPALILVLAGDICLQNWQQLWSWWTQAPLSLAQGPLLPRL
GIAVITLAFPASIYAIARLLLKKQRLQRTLYGLLPLLWALMLAQYLPLGMSEGGAFLPVS
FSPLDLSWQEALPVWRADSHVIGFCQSGAVGVGLLWSVVLLRRQLATHRSAWIVASAWVS
VLAIGGRWLVNS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaggcagcaactcaatttcttactttgatagcacgcatcaaacgatcgaattcttt
agagacctgcgttcaaaggcacatacagaacacactggaggagtcctcttctgccataaa
aaatctgtgacagggactccgcttcaccctctccaacagttggctccctacatcgtgggt
cgcgttcggcgtggagttgtaggcagcagtcgctacgcctgcaagctacgtgaagcgatc
cgaggcgcagcctcagattccgagcgcagacctgttctgatctacggggagcctggcttg
gaaaaggacaacatcgcgtctttgattcattttggatcgccagaccgcaagcatttcatg
cttcggttggatggagctcttctcaaaccagatggcagcgacattttcggctctcaggga
gatccgtccaaaccgtcattactgaaacaactggggcatggatcgctactaattgatcag
ctggaacgggtgccagaacagctcaaatctcgcctgttggagttagcagaaggaaaggtt
gatatccaagtccggctgatcttcacctcggaaacagtcagtcctggctttgatcgttgc
tgcacattgatccgagttccccccctgcgtgtacgccggcaggatctcggtgaatggctg
cgctacggagttcggcaacgcagttccatcttgggctgggctcaagctcctctagttccg
gaggcggtggtgaaacagttgcaggcttacgacttccccaacaatctgcgtgagcttgaa
acgctgatacagcaggctctccaacaaatggaacaggaaggccaagccgcaccaaacgtg
attccagaagtcgtgttctggacacctacaaagcaacagctctatcgcttcgacatttgg
cgttggaaaccaaagctacgcgagttgatgcgctcccagtcgttatggaatgggttgctg
tttggaattgtgagctggttgtttgtgttggtgaacctttggttatggctcggaccacaa
gaccgggcccataacggcgcactcaatctgttctgggcctggtggtggcctctcattctt
ttgagttacccattcgtgggtcgactgtggtgttccttctgcccattcatggtctgggga
gagattgttcaacgcagcgctcgcagacttggctggcaacccaatcgctggcctcgaagt
caaagcgacacttgggcctcacccgtgctcgcagctggattttctgtgattttgatctgg
gaagaggtgtggaacctacaaaacacagcttggttgagcagctgcctcttgcttgtcatt
acaacaggtgcagtgatcagttcgctgcactttgaaaaacgattttggtgtcgttacctc
tgtccgatcgggggaatgaatgggttatttgccaaactttccgtcttagaactacgagcg
aaagcaggaacatgtagcggcagctgcagtagttatgcctgtttcaaaggaggaccatct
gaaggggacggatttgccacggaaggatgcccacttggaacgcaccccgcccatctacaa
gacaaccgcaactgcgttctctgtctcacttgcgcgcaggcctgcccacatcaatccgtg
caaatttctgtgcggccacctgcagcagacattcagcgcacgatgcaatttccaagtggc
gaaccggcgcttattttggttttagcaggtgatatttgcttgcaaaactggcaacaacta
tggagctggtggactcaggctccgctgagccttgcccaaggtccattgctcccaagactt
ggcatcgcggtaatcacgctggcttttcctgcaagcatctacgcaatcgctcgtcttctg
ctcaaaaagcaaagactccaacgcacactctatggattgctgccattgctttgggcactc
atgctggctcaatatctacctctaggtatgagcgaaggtggagctttcttaccagtgagc
ttctctcctcttgatctttcctggcaggaagcgctgcctgtttggagagctgattcccat
gtgattggtttctgccaaagcggagctgtaggtgtgggtttgttgtggagtgtggtgcta
ctcaggcgtcagctggctacccatcgctcggcctggattgtcgcttccgcttgggtttcc
gttcttgcaataggtggacgatggctcgtcaacagctaa
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