Synechococcus sp. CC9311: sync_2248
Help
Entry
sync_2248 CDS
T00390
Name
(GenBank) SpoIID/LytB domain protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
syg
Synechococcus sp. CC9311
Brite
KEGG Orthology (KO) [BR:
syg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syg01011
]
sync_2248
Enzymes [BR:
syg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
sync_2248
Peptidoglycan biosynthesis and degradation proteins [BR:
syg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
sync_2248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
RRM_1
Motif
Other DBs
NCBI-ProteinID:
ABI45815
UniProt:
Q0I7X6
LinkDB
All DBs
Position
complement(1974607..1975992)
Genome browser
AA seq
461 aa
AA seq
DB search
MPIALMALSFDQRVAQAEQEPSMRVLLSQAPVVRLRADGDQPFLVRGLSGGNQHMRSLEV
SLRAGRFKISGQMSDGSSRSLSARSAIEVQSDDPRGIWLGSRRYRGRLQFLVRGGQVQVV
NHLGIETYLASVVGSEMPHRWPLPALQAQAVAARTYALRQRGKAGDFDVKATVSSQVYRG
VESETPSTIEAVESTRSLVLVHAGRLINAVFHSSSGGATEPSGEVWRNQLPYLVSVADHD
QHSPVHRWNKRFNDDQLRDLFRETGGVKRLQVLKTSSTGRVRTARVQGPRGSLVLTGREL
RKRLGLKSTMVQFELINGTTASSTASARRARQAAPQASTHAAPPLIGLWQDSASGPDTTS
RSSGRLASLLPPPPLPPLNQSAFNQPRPDFRVGEMVLEARGQGFGHGVGMSQWGAHGLAL
QGADFRQILLHYYRGAEIRPYRSSDDPAVALRLRSESAWWS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgctttgatggcgctcagctttgatcagcgagttgcgcaggcggaacaggag
ccgtcgatgcgggtgctgctgtctcaagctccggtggtgaggcttcgtgcagatggagat
cagccctttctggtgcggggtctgagtggcggcaatcaacacatgcgctcgctggaggtg
agtctgcgagcggggcgcttcaagatcagtggtcaaatgagcgacgggtcgtctcgctca
ctgtcagctcgctctgcgatcgaggtgcaaagcgacgatccccgtgggatttggctcggc
tcccggcgttatcgcgggcggttgcagtttttagtgcgtggcggccaggtgcaggtggtg
aaccaccttgggattgagacttatctggccagtgttgtggggagtgaaatgcctcatcgt
tggccgttgccggctttgcaagctcaggctgtcgcggcgcgcacctatgccctcaggcag
cgcgggaaggcaggagacttcgatgtgaaggcaaccgtgtccagccaggtgtaccgcggg
gttgaatccgaaacccccagcacgatcgaggccgtggaaagcacgcgctctttggtctta
gtacatgctggtcggttgatcaatgctgtgtttcacagcagctctggtggtgcaacggaa
ccgagtggtgaggtttggcgcaatcaacttccctacctggtcagcgttgcggatcacgat
cagcacagtcctgtgcatcgttggaacaaacgttttaacgatgatcagctgcgggatctc
ttccgtgaaaccggaggtgtcaaacgcttgcaggtgcttaagacaagctcaaccggtcgg
gtgcgtacggcgcgtgtgcaaggcccccgtggctctttggtcctaacggggagggagctg
cgcaagcgactcggtctcaaaagcacgatggttcaatttgagctcatcaatggcaccacc
gcgtcttcaaccgcatctgctcggagagcccgccaagcagcgcctcaagcatcaactcac
gcagcccctcctttgatcggtctatggcaagactccgcaagtggtcctgacaccacatca
agaagctcaggccgactggcgtctctattgccaccaccgcctcttccccctctcaaccag
tcagcttttaatcagccacgtcctgacttcagggtgggtgagatggttctcgaagcgcgt
ggtcaaggctttggacatggtgttgggatgagtcagtggggagcccatggtttggcgctt
cagggtgctgattttcgtcagattcttttgcactactaccgcggggctgagattcgcccc
tatcgctctagtgatgatccagctgtggcgctccggctccgttcagagtcagcctggtgg
agttga
DBGET
integrated database retrieval system
