Synechococcus sp. CC9311: sync_2282
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Entry
sync_2282 CDS
T00390
Name
(GenBank) GroEL chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
syg
Synechococcus sp. CC9311
Pathway
syg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
sync_2282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syg03019
]
sync_2282
03110 Chaperones and folding catalysts [BR:
syg03110
]
sync_2282
03029 Mitochondrial biogenesis [BR:
syg03029
]
sync_2282
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syg04147
]
sync_2282
Enzymes [BR:
syg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
sync_2282
Messenger RNA biogenesis [BR:
syg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
sync_2282
Chaperones and folding catalysts [BR:
syg03110
]
Heat shock proteins
HSP60 / Chaperonin
sync_2282
Mitochondrial biogenesis [BR:
syg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
sync_2282
Exosome [BR:
syg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
sync_2282
Exosomal proteins of other body fluids (saliva and urine)
sync_2282
Exosomal proteins of breast cancer cells
sync_2282
Exosomal proteins of colorectal cancer cells
sync_2282
Exosomal proteins of bladder cancer cells
sync_2282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
GTP_EFTU_D4
EAD9
Motif
Other DBs
NCBI-ProteinID:
ABI45474
UniProt:
Q0I7U3
LinkDB
All DBs
Position
complement(1997748..1999379)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKRIIYNENARRALEKGIDILAEAVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIE
LEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGID
KASDFLVGKIQENAKPIADSNAIAQVGTISAGNDEEVGKMIADAMDKVGKEGVISLEEGK
SMETELEVTEGMRFDKGYISPYFATDTERMEAVLDEPYILLTDKKIGLVQDLVPVLEQIA
RTGKPLLIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMIEDMAVLTNGQLI
TEDQGLKLENAKLEMLGTARRVTINKDTTTIVAEGNEVAVSTRCEQIKKQMDETDSTYDK
EKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHM
APALEEWAASNLSGEELIGANIVASALTAPLMRIAENAGVNGAVVAENVKSKSFNEGYNA
ANGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADMPEKKEAAAAGGGMGGD
FDY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcgcattatttataacgagaacgctcgccgtgctctcgaaaaaggcatcgac
attcttgccgaagctgtcgcagtaaccctcggtccaaaaggccgcaatgtggtactcgag
aaaaaatttggtgctccccagatcatcaatgatggagtcacgatcgctaaagagatcgag
cttgaggatcacatcgaaaacaccggtgttgctctcatacgtcaggctgcatccaaaacc
aacgatgctgctggagatggcacaacaactgccaccgttttggctcatgccatggtgaaa
gcaggcttgcgcaatgtggcagccggcgctaacgcaatcactttgaagaagggtattgat
aaggcttccgatttcttggttggaaagattcaagaaaatgcaaagccgattgcagacagc
aacgcaattgctcaggttggcacaatctccgccggcaatgacgaagaagttggcaagatg
attgctgacgccatggataaagttggcaaagaaggcgtgatttctcttgaagaagggaaa
tccatggagaccgagcttgaggtcactgagggtatgcgtttcgataagggttatatctcc
ccttatttcgcaacagacacggagcggatggaagcggttcttgatgagccttacatcctc
ttaaccgacaaaaagatcggattagtacaagatttggttcctgtgcttgagcaaattgct
cgcactggaaagcctcttctgatcattgctgaggatatcgagaaagaagctctcgccacc
ttggtagtgaaccgcttgcgcggtgtgctcaatgtggcagccgtgaaggctcctggtttc
ggtgatcgccgcaaggcaatgatcgaagatatggcagtcctgaccaacggtcagttgatc
acggaagatcaaggcctgaagctcgaaaacgccaagctggagatgttgggtactgcccgt
cgcgttaccatcaacaaagacaccaccaccattgttgccgaaggcaatgaggttgctgta
agcacgcgttgcgagcagatcaagaagcagatggatgagaccgattccacctatgacaaa
gagaagcttcaggagcgtcttgccaaattggctggtggcgttgctgttgtgaaggtggga
gcagccaccgagaccgagatgaaggacaagaaacttcgtctcgaagatgccatcaacgcc
actaaagcagccgttgaggagggcatcgttcctggtggtggtacaaccttggctcacatg
gcaccagccttggaggagtgggcagcctccaacctgtccggcgaggagttgatcggtgcc
aacatcgtggcctcagcgttgactgctcctctgatgcgcatcgctgaaaatgctggcgtg
aacggtgctgtcgttgctgaaaacgtcaagtccaagtcctttaacgagggctacaacgcg
gccaacggcgagtatgtcgacatgctttctgcaggcattgttgatcctgccaaggtgact
cgttcaggtttgcaaaatgctgcttcgatcgctggcatggtgttaaccacagaatgcatc
gtggctgatatgccagagaagaaagaagctgctgctgctggtggcggtatgggcggcgac
ttcgactactaa
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