Synechococcus sp. CC9311: sync_2337
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Entry
sync_2337 CDS
T00390
Name
(GenBank) Superfamily II RNA helicase
Organism
syg
Synechococcus sp. CC9311
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Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Ski2_cyano_M
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
nSTAND3
ARM_TT21_5th
ATPase_2
IstB_IS21
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
ABI46978
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Position
complement(2047352..2050084)
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AA seq
910 aa
AA seq
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MSPDVSQLFPFPLDGFQLESIDALNQGHSVVVSAPTGSGKTLVGEYAIHRAIAHGQKVFY
TTPLKALSNQKLRDFREQFGAENVGLMTGDLSVNREARVVVMTTEIFRNMLYAEADEHDD
PLADVESVVLDECHYMNDSQRGTVWEESIIHCPPSVQLVALSATVANAGQLTDWIEKVHG
PTRLVLSDFRPVPLQFSFCSAKGLHPLLNEQGTGIHPNCKVWRAPKGHKRKGRSPRPPQP
EAPPISFVVAQMAQREMLPAIYFIFSRRGCDKAVRDLGVQCLVTEAEQSIIRERLEAYTV
ANPEAVRDGQHADALLRGIASHHAGVLPAWKELIEELFQQGLVKVVFATETLAAGINMPA
RSTVIASLSKRTERGHRPLMASEFLQMAGRAGRRGLDTQGYVVTVQSRFEGVREAAQLAT
SPSDPLVSQFTPSYGMVLNLLQRHDLAKARELVERSFGRYLASLDLVEEEEHLGELRMQL
AQLQGTAGDVPWEDFEDYEKQRGRLREERRLLRILQQQAEETLAHELTIALQFASVGTLV
SLKSPRLRGGVTPAVIVEKCDGPGQFPLLLCLTLDNVWMMLPCQGVVSLHAELSCLQVDG
VKSPDLSRSGELRHGDQDSGRLALAVAHMARRHDMTTAQYDLAGEVLSQVRLVQELEDQL
EGHPAHRWGDRKQLKKHRRRMEDLQHEIRERQQLLHHRSNRHWEIFLALIEILRHFGCLD
DLEPTEIGRTVAALRGDNELWLGLALMSGHLDELPPAELAAVFEAISTEVNRPDLWSAFP
APPLAEEALHDLSGIRRELLRAQERFKVVVPAWWEPELMGLVEAWAKGTSWNDLIANTSL
DEGDVVRIMRRTVDLLAQVPYCEAISEQLRKNARAALIAINRFPVAEADQVLKAAAAESS
GLNAATERAA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaccggatgtttcccagctgtttccattccctttggatgggttccagttggaatcg
attgatgccttgaatcaagggcattccgttgtggtgagtgcgcccacgggatctggcaag
actttggtaggcgagtacgcgattcatcgggcgattgcccatggccaaaaggtgttttac
acaacaccgctcaaggccttatccaatcaaaagttgcgcgattttcgcgaacagtttgga
gctgaaaatgttggcttgatgacgggtgacttgagcgttaaccgcgaggctcgagtggtg
gtgatgaccaccgagattttccgcaacatgctctatgccgaagcggatgagcatgacgat
cctcttgccgatgttgagtcggtcgtgctcgatgagtgtcactacatgaatgattctcag
cggggcaccgtctgggaagaatcgatcattcactgtccaccttcagttcaattggtggcg
ttgtccgccaccgtggccaatgcggggcaactcaccgactggatcgagaaggtgcacggt
ccgacgcgtctggtactcagtgattttcgtccggtccctctgcagttcagtttttgtagt
gccaagggtctccatccacttttgaatgaacagggaactggaattcatcccaattgcaag
gtttggcgtgctccaaaagggcataaacgtaaaggtcgttcgccaaggccgcctcagccg
gaagcaccaccgatcagctttgtggtggcgcaaatggcacaacgggagatgctccccgcc
atttatttcattttcagccgccgtggttgcgacaaggccgttcgtgaccttggagttcag
tgtttggtcacggaggccgagcaatccatcattcgcgagcggctggaggcttacaccgtc
gcaaatcctgaggctgttcgcgatggccagcatgctgatgctttgctgcgtgggattgca
tcccatcacgctggagtccttcctgcctggaaagagctgatcgaggagcttttccagcag
gggttggtaaaggtggtgtttgccaccgaaacgttggcggcgggcatcaatatgccagcg
cgcagcactgtgatcgcctcgctctcgaagcgcacggaacgggggcatcgccccttgatg
gctagtgaatttctgcagatggctggtcgcgcgggccgtcgcggcttagatacgcagggt
tacgtggtgacggttcagagtcgatttgagggggtgcgtgaggcggctcagttggctacg
agcccctctgatccgttggtgagtcaattcacccccagctacggcatggttctcaacctg
ttgcagcgtcacgacttagctaaggccagagagctggtggagcgcagctttggccgctac
ctcgccagcttggatttggtggaggaagaagaacatcttggtgagttgcggatgcagcta
gcccagttgcaaggcacggcaggtgatgtgccgtgggaagactttgaggactatgaaaaa
cagcgcggccgtctccgcgaggagaggcgtctgctcaggattcttcagcagcaggctgaa
gaaaccctggcccacgaactgacgatcgccctccagttcgcaagcgtcggaaccttggta
agccttaaatctccccggctgcgtggaggggtaacgccggccgtgatcgtggagaaatgc
gatggccccgggcagttcccattgctgctttgtttaacgctggacaacgtttggatgatg
ttgccttgtcagggggtcgtgagtttgcatgcggaattgagctgtttgcaggttgatggc
gtgaagtcgcctgatctcagccgttccggcgagctccgtcatggtgatcaggacagtggc
cgtttggcattagcggtggctcacatggcacgtcgtcatgacatgaccacagctcagtac
gacttggctggcgaagtgttgtctcaggtgcgcttagttcaggaattggaagatcaactg
gaggggcatccggctcatcgctggggagatcgcaagcaactcaagaagcaccggcgacgt
atggaagatcttcagcacgaaattcgtgagcgccagcaattgctccatcaccgctccaac
cggcactgggagatatttttagctctcattgagatcctgcggcactttggctgcctggat
gacttggaaccaacggagataggtcgcaccgttgccgctcttcgtggtgacaacgagctc
tggcttggtctggcactgatgagtggtcatctcgatgagttgcctccagcagaactggct
gcagtgtttgaggccatcagcacggaggtcaatcgtccagatctttggagtgcattcccg
gcgcctcctcttgcggaagaggctctgcatgatttgtctggtatccgtcgggagcttttg
cgggctcaggagcgtttcaaggtggtggtgccagcttggtgggagcctgaattgatgggc
ttggtggaggcttgggcgaagggaacatcctggaatgatctgattgctaacacctctttg
gatgaaggagatgtggtgcggatcatgcggcgcacggtggatttactggctcaggtgccc
tactgcgaggcgattagtgagcagctgcgcaaaaacgcccgtgcggccttaattgcgatt
aatcgtttcccggtcgcggaggctgaccaggtactgaaggccgcggctgccgaatccagc
ggtctcaatgccgcgactgaacgggctgcctga
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