| Entry |
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| Symbol |
rpoB
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| Name |
(GenBank) DNA-directed RNA polymerase, beta subunit
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| KO |
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| Organism |
syg Synechococcus sp. CC9311
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:syg00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
sync_2358 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:syg03021]
sync_2358 (rpoB)
03400 DNA repair and recombination proteins [BR:syg03400]
sync_2358 (rpoB)
Enzymes [BR:syg01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
sync_2358 (rpoB)
Transcription machinery [BR:syg03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
sync_2358 (rpoB)
DNA repair and recombination proteins [BR:syg03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
sync_2358 (rpoB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2068962..2072255)
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| AA seq |
1097 aa
MSSSAIQVAKTVTYLPDLVEVQRASFKWFLDKGLIEELESFSPITDYTGKLELHFVGSEY
RLKRPRHDVEEAKRRDATFASQMYVTCRLVNKETGEIKEQEVFIGELPLMTERGTFIING
AERVIVNQIVRSPGVYFKDEQDKNGRRTYNASVIPNRGAWLKFETDKNDLLHVRVDKTRK
INAHVLMRAMGLSDNDVVDKLRHPEYYKKSIEAANDEGISSEDQALLELYKKLRPGEPPS
VSGGQQLLQTRFFDPKRYDLGRVGRYKINKKLRLTIPDSVRTLTHEDVLSTLDYLINLEL
DVGGASLDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIKERMTVGETDSLTPAQLVNP
KPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRISALGPGGLTRERAGFAVRDIHPSHY
GRLCPIETPEGPNAGLINSLATHARVNEYGFIETPFWRVENGVVQKSGDPIYLSADLEDE
CRVAPGDVATDADGQILAELIPVRYRQDFEKVPPEQVDYVQLSPVQVISVATSLIPFLEH
DDANRALMGSNMQRQAVPLLRPERPLVGTGLETQVARDSGMVPISRVNGTVTFVDATAIV
VRDEEGYDHTHFLQKYQRSNQDTCLNQRPIVRQGDPVIIGQVLADGSACEGGEIALGQNV
LIAYMPWEGYNYEDAILVSERLVNDDLYTSVHIEKYEIEARQTKLGPEEITREIPNVAEE
SLGNLDEMGIIRIGAFVESGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRV
PSTERGRVVDVRIYTREQGDELPPGANMVVRVYVAQRRKIQVGDKMAGRHGNKGIISRIL
PREDMPYLPDGTPVDICLNPLGVPSRMNVGQVFELLMGWAAANLDCRVKIVPFDEMYGPE
KSQQTVQAYLKEAASQPGKDWIYNPEDPGKLLLRDGRTGEPFDQPVAVGYSHFLKLVHLV
DDKIHARSTGPYSLVTQQPLGGKAQQGGQRLGEMEVWALEAYGAAYTLQELLTVKSDDMQ
GRNEALNAIVKGKPIPRPGTPESFKVLMRELQSLGLDIAVFTDEGKEVDLMQDVNPRRST
PSRPTYESLGVADYDED |
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| NT seq |
3294 nt +upstreamnt +downstreamnt
atgagcagcagcgcgattcaagtcgccaagaccgtcacttacctccccgatctagtggag
gtacagcgggcaagttttaagtggtttctggataagggcctaatcgaggagctggagagc
ttctcacccattacggattacaccggcaagctggagctgcacttcgtcggcagtgagtat
cgcctgaagcgtcctcggcatgatgtagaagaggcaaaacgtcgtgatgcgaccttcgcg
tctcagatgtatgtaacttgccgtttggtcaataaagaaacgggtgagattaaggagcaa
gaagtttttattggagaacttccattgatgactgaacgtggaacgttcatcatcaatggt
gctgagcgggtcatcgtcaaccagattgttcgtagccctggcgtttatttcaaagatgag
caagataaaaacggtcgtcgtacttacaacgcaagcgtgattcccaatcgtggggcttgg
ttgaagtttgagactgataaaaacgacctgctgcacgttcgtgttgacaaaacacgcaaa
atcaatgcccacgttttgatgcgtgcgatgggactgtccgacaacgatgttgtcgataag
ctcagacaccccgagtactacaaaaaatcgatcgaggccgcgaacgacgaggggattagc
tccgaggatcaggcgctccttgagctctataaaaagctgcgtccaggtgaaccaccctct
gtgagcggtggccagcagctgttgcagacccgcttctttgaccccaagcgttacgacctc
ggtcgtgtgggtcgttacaagatcaataaaaaacttcggctcacgattcccgattcagtc
cgcaccctcacccatgaggatgttttatccaccctcgactacctcatcaatctcgagctt
gatgttggtggagcaagccttgacgacattgaccacctggggaatcgtcgtgttcgctct
gtgggagagcttcttcagaaccaggttcgcgttggcttgaatcggcttgagcggatcatc
aaggagcgaatgacagttggtgaaaccgactcactcactcctgctcaattggtcaatccc
aagccgcttgtggcggccattaaggagttcttcggctccagccagttgagccagttcatg
gatcagacgaatcccctcgctgagctcacccacaaacgcaggatttcggctctcggccca
ggcggcctcactcgtgaacgcgcaggttttgctgttcgagatatccacccttctcattac
ggtcgactttgtccgattgaaactccagaaggcccgaatgctggtctcatcaactctttg
gctacccatgcccgagtgaacgaatatggcttcatcgagactccgttttggagagtcgag
aacggagttgttcaaaagagcggagacccgatttacctctctgcggatcttgaagatgag
tgtcgcgtcgctcccggtgacgttgcaactgatgcagacggtcaaattttggctgagctc
atccctgttcgttacaggcaggacttcgaaaaagttccgcctgagcaggtcgattacgtg
cagctctccccggtgcaagtgatttcagtggcaacgtcactgattcctttcctggaacat
gacgatgccaaccgcgccttgatggggtccaacatgcagcgtcaggcggtgcctttgctc
cgtccggaacgacctcttgttggtactggtctagaaactcaggtggctcgtgactcaggc
atggtcccaatttcacgggtgaatgggaccgtcaccttcgttgatgccacggcgattgtg
gtgcgagatgaagagggctacgaccacacgcattttctgcagaaataccagcgctcgaac
caagacacctgcctgaaccagcgtcccatcgttcgacagggtgatccagtgatcattggg
caagttcttgctgatggttcagcttgtgagggcggagaaattgctctcggccagaatgtc
ctgatcgcttatatgccctgggagggatacaactacgaggatgcgatccttgtgagcgag
cgtttggttaacgatgatctatacacttccgttcatatcgagaagtatgagattgaggct
cgtcagactaaattagggcctgaagagatcacccgtgaaatccccaacgttgccgaagaa
agcctcggtaatctcgatgagatggggattattcggatcggtgcctttgtggaaagtgga
gacatccttgtcggcaaagtcactccgaaaggtgaatctgatcaacctcccgaagaaaaa
ctgctgcgtgcgattttcggagagaaagcacgtgatgtccgcgacaattctttgcgcgtt
cccagtaccgaacgtggccgtgtcgtcgacgtaaggatctacacccgtgaacagggtgat
gagctaccccctggcgccaacatggtggtgagggtgtatgtggcccagcgtcgcaaaatt
caggtcggcgacaaaatggctggtcgccacggtaataagggaattatcagtcggattctt
ccccgtgaagacatgccgtacttgcctgatggcactccagtggacatctgtctcaacccc
ttgggtgtgccgagtcgtatgaacgtgggacaggtctttgagttgttgatggggtgggcg
gctgccaatctcgactgccgcgtcaaaatcgttcccttcgacgagatgtacggccctgag
aagtcccaacaaacagttcaggcttacctcaaggaagctgcgagtcagccaggaaaagat
tggatctacaaccccgaagatccaggaaaactcttgctgcgcgatggacggactggcgaa
ccctttgaccaacctgttgctgttggatattcccacttccttaagttggtccacctcgtg
gacgacaagatccatgcgcgctccactggcccttactccttggtgactcagcagccattg
ggtggtaaggcccagcaagggggtcagcgtttgggtgaaatggaggtgtgggcacttgag
gcctatggcgccgcctacacgttgcaggagctgctcactgtcaagtcggacgacatgcag
ggacgcaacgaagctctcaacgccatcgtcaaaggcaagcccattcctcgtccaggaaca
cctgagtccttcaaggtgctcatgcgtgaactccaatctcttggcctggatatcgctgta
ttcaccgacgagggcaaagaagtggacctgatgcaagacgtgaatcctcgccgtagcacc
ccaagcagacccacgtacgaatccctaggcgtcgcggattacgacgaggactga |
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