Synechococcus sp. CC9311: sync_2770
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Entry
sync_2770 CDS
T00390
Name
(GenBank) helicase, Snf2 family protein
Organism
syg
Synechococcus sp. CC9311
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
AAA_22
AAA_19
PapA_C
Motif
Other DBs
NCBI-ProteinID:
ABI47912
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Position
2435438..2438632
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AA seq
1064 aa
AA seq
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MSLLHATWLPAIRTPTSSGRAALLVWADTWRVAEPAGPSTTPALHPFTLSPDDLRALLTE
RDLLPDGIIDATACLTLPSRSVKPRKKRETETSSTEQPSWTGLPLQAGEPIPKQTEWWPW
QVQGLAIDPMAATAWLSKLPLSGRHPDLADELRWWSHMQRWSLSLVARSRWLPQVELSKG
EGYPHRARWVPLLNREEDRRRLEDLAAGLPLVATCALPWREPTGKRSNRITRLRPEAMRA
ANPVACCRPRSGRLRVATLLADLMDAQLRKGFTPDPDGLDPLLRAWEEALSSDTGEIQLS
DEETERLATASNHWREGVAGNVAAARACLELATPADDEDLWPLRFFLQAEADPTLKLPAG
AAWAAGPSGLQLGEIKVEHPSEVLLEGMGRALTVFQPIERGLDSATPESMQLTPAEAFVL
VRTAVRQLRDVGVGVDLPPSLSGGLASRLGLAIKAELSERSRGFTLGENLDWSWELMIGG
VTLTLRELERLAGKRSPLVRHKGAWIELRPNDLKNAERFCAANPDLSLDDALRLTATEGD
TMMRLPVHQFDAGPRLQAVLEQYHQQKAPDPLPAPEGFSGQLRPYQERGLGWLAFLHRFD
QGACLADDMGLGKTIQLLAFLQHLKAENELKRSVLLIAPTSVLTNWKREATAFTPELKVH
EHYGPKRPSTPAALKKALKDVDLVLTSYGLLQRDSELLESHDWQGLVIDEAQAIKNPSAK
QSQAARDLARPKKNSRFRIALTGTPVENRVSELWALMDFLNPRVLGEEEFFRHRYRMPIE
RYGDLSSLRDLKARVGPFILRRLKTDKAIISDLPEKVELSEWVGLSKEQKSLYAKTVEDT
LDAIARAPRGKRHGQVLGLLTKLKQICNHPALALKEQGASEDFLKRSVKLQRLEEILDEV
VEAGDRALLFTQFAEWGKLLQDYLQRRWRSEVPFLSGSTSKSERQAMVDRFQEDPRGPQL
FLLSLKAGGVGLNLTRASHVFHIDRWWNPAVENQATDRAYRIGQTNRVMVHKFITSGSVE
EKIDRMIREKSRLAEDIIGSGEDWLGGLEMGQLKELVSLEDNQA
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgcacgccacctggcttccggccattcgtactcctaccagctctggacga
gctgcccttttggtgtgggccgacacctggcgcgttgccgagcctgcaggcccaagtaca
acccctgcgcttcacccgttcaccctcagcccagacgatctccgggccttgctcacggaa
cgggatcttttacccgacggcatcattgatgccacggcatgcctcaccctgccgagccgc
agcgtgaagccccgaaaaaaacgcgaaacagagaccagcagcactgaacagcccagctgg
acaggccttcccttacaggctggagaaccgatccccaaacaaacagagtggtggccttgg
caggttcaggggctcgcaattgaccccatggcggccaccgcctggctgtccaaactgcct
ctgtcaggacgacatcctgatttggctgatgagttgcgctggtggagtcacatgcagcgt
tggtccctcagcctcgtagcccgaagtcgctggctcccccaagtggagctgagcaagggc
gagggctatccccatcgcgcccgctgggtaccgcttctgaatcgggaagaagacaggcgc
cgtctagaagacttggccgcagggctccctctcgttgccacctgtgccctgccttggcga
gaaccaacgggcaaacgcagcaaccgaatcaccaggctcagaccagaagccatgcgcgcc
gcgaatcccgtggcttgctgcaggcctcgcagcggacgactaagggttgccacgttattg
gccgacctgatggacgcgcagctgcgcaagggctttactcctgaccctgacggcttggac
cccctgctacgcgcctgggaggaggccttgagctcggatacaggtgaaatccaactcagc
gatgaagaaaccgaacgcctagccaccgccagtaatcattggcgtgaaggggtcgctgga
aatgttgctgcagcccgcgcctgcctggagctggcaacaccagcggacgatgaggacctt
tggccactgcgcttctttctgcaggcggaagcagatccaaccctcaagctgcccgcagga
gcggcatgggctgcaggccccagcggcctccaacttggggaaatcaaggtggagcacccc
agcgaggtcttgctcgagggtatggggcgagccctgaccgtgttccaaccgatcgagcgc
ggactggacagtgccacgccagagagcatgcagctcacaccagctgaagcgtttgttttg
gtgcgcacagcagtccgacaactgcgggatgtgggcgttggcgttgacctgccaccaagc
ctgtctggagggctggctagcaggcttggcctcgccatcaaggcagaactctccgagcgt
tcgcgaggcttcacgctcggtgaaaaccttgactggagctgggagctgatgatcggcggg
gtgacgctgaccttgcgagagcttgagcgattggctggtaagcgcagccctctggtgcgt
cacaaaggggcttggatcgaactacggcccaatgacctcaaaaatgccgagcgcttttgc
gccgccaatccagacctgagcctcgacgacgcgcttcggctcaccgccaccgaaggcgac
acgatgatgcgcctgcccgtgcatcaatttgatgccggtccgcggctgcaagccgtgctg
gagcagtaccaccagcagaaagcgccagacccactccccgctcccgagggcttttcgggt
caactcaggccctatcaagagagaggactcggctggcttgccttcctgcatcgcttcgac
caaggcgcctgcttggccgatgacatgggccttggcaaaaccatccagctgctggctttt
ctgcaacacctcaaggcagaaaacgaactcaagcgatcagtgcttttaattgcacccaca
tctgtccttacgaactggaaacgagaggcaacagcgtttacacccgagctcaaggtgcat
gagcactacggtccaaaacgcccgagcaccccagcagcactgaaaaaggcgctgaaagac
gtggatctcgtgctcaccagctatggcctgttacaacgcgacagtgagctcctcgaaagt
cacgattggcaaggcctcgtgatcgatgaagcgcaggcgataaaaaacccctccgcgaag
caaagccaagccgcccgtgatctggcccgcccgaaaaagaacagccgttttcgcatcgca
ctcaccggcacaccagttgagaaccgcgtcagcgagctctgggccctgatggacttcctc
aaccctcgggtactgggagaggaagaatttttccgacatcgctatcgcatgccgattgag
cgttacggagacctgtcctcgctgcgcgacctcaaagcccgagtgggacctttcatcctc
agacgactcaaaacagacaaagcgatcatctcggatctacccgagaaggtggaattgagc
gagtgggttgggctgagcaaagagcagaagtcgctgtatgccaaaaccgttgaagacacc
ttggatgccattgcccgcgcgccacgcggcaaacgtcatggtcaggtgttgggtctgctc
accaagctcaagcagatttgcaaccaccctgcgcttgccctcaaggagcagggcgccagc
gaagatttcctcaaacggtccgtgaagctgcaacgtctcgaagaaattttggacgaggtt
gtagaagctggggatcgagccttgctgtttacccagttcgcggaatggggcaagttgctc
caggattatttgcaacgacgctggcgcagcgaagttcccttcctcagcggcagcaccagc
aaaagtgaacggcaagccatggtcgatcgcttccaggaggatccgcgcgggccccagctt
ttcctgttatcactcaaagctggcggagtcggcctcaacctcacgcgcgccagtcatgtc
tttcacatcgaccgttggtggaaccccgccgttgaaaatcaagccacggaccgtgcctat
cgcatcggccaaacgaaccgggtcatggtgcataagttcatcaccagcggctccgttgag
gagaaaattgaccgcatgatccgcgagaagtccagactggcggaagacatcattggctcc
ggcgaagactggcttggaggcctggaaatgggacaactcaaagagctagtgagcctggag
gacaaccaagcatga
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