Synechococcus sp. WH 8109: Syncc8109_0006
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Entry
Syncc8109_0006 CDS
T03783
Name
(GenBank) DNA gyrase/topoisomerase IV, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syh03032
]
Syncc8109_0006
03400 DNA repair and recombination proteins [BR:
syh03400
]
Syncc8109_0006
Enzymes [BR:
syh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Syncc8109_0006
DNA replication proteins [BR:
syh03032
]
Prokaryotic type
DNA Topoisomerases
Syncc8109_0006
DNA repair and recombination proteins [BR:
syh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Syncc8109_0006
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AHF62432
UniProt:
W0GQP6
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Position
complement(5702..8170)
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AA seq
822 aa
AA seq
DB search
MAEERVEPIALHREMQRSYLEYAMSVIVGRALPDARDGLKPVQRRILYAMQELGLTPDRP
YRKCARVVGDVLGKYHPHGDQAVYDALVRLVQTFSSRHPLLDGHGNFGSVDDDPPAAMRY
TETRLAPISHQAMLEEIGEDTVDFAPNFDGSQQEPTVLPAQLPFLLLNGCSGIAVGMATS
IPPHNLGEVVEGLIALIRKPELSDEKLLELIPGPDFPTGGEVLISSGLRDTYLHGRGSIP
MRGVAHTEEVQPGKGRHKRNAVVVTELPYQLSKAGWIEKLAESVNDGKIGGIADIRDESD
REGMRVVVELRRDADPENVLKDLQRRTALQSNFGAILLALVDGQPQQLSLRQLLQTFLDF
RELTLIRRTSHALRKTEDRLEVVEGLISALNNLQAVIAMIQEANDAASARASLMVRLDLS
ERQADAVLAMPLRRLTGLEQESLRQELDELRAERQRLKLLLDNRDQLLDAMVTELKALKK
RFSTPRRTRLVEGGDALMAERAASQRPNTELLRQQALAALPGDGRVLIQADGQVKIVTPQ
VLGRLHLNDPCPIGDAPSPARVILPIEPPPRLLAVSARGRIAQVRWEFAGQQPGPIDRFL
PTGLDGDPIVSLLSLPSQNIDNLSLGLLSSDGRFKRLPLSEIVDLSGRATSVLKLKEGVE
LNSAVICRDQGTLALISDIGRLLRLRVTEDSLPLMGRLAQGPMTMRLLPGEHIVGAVCTE
QTPLMLITRQGMIGRIDYSGLRYNQRGDLGSMALQIDAESDRLVGISTGPGLVGVRTSKD
RHGRLDPDNINVSKPGDKPTEQASLQKGEAIVDVINAIQPNP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagcgcgttgaaccgatcgccctgcatcgggagatgcagcgctcctacctc
gaatacgcgatgagcgtgatcgtgggtcgggcgttgcccgatgcccgcgatggcctcaaa
cccgtccaacggcggattctgtacgcgatgcaggaactggggttgaccccagaccgtcct
tatcggaaatgcgcaagagttgttggtgacgtcctcggcaagtaccacccgcatggtgat
caagccgtttacgacgccttggtgcggcttgttcagaccttctccagccgtcatccactg
ctcgacggccatggcaatttcggctcggtggatgacgacccaccggcggccatgcggtac
accgaaacccgactggcgccgatctctcaccaggcgatgctggaggagatcggtgaagac
acggttgatttcgcaccgaacttcgatgggtcccaacaggaacccaccgttcttccggcc
cagcttcccttcctgctgctgaatggctgctccggcatcgccgttggcatggccaccagc
attcccccgcacaacctgggagaggtggtggaaggacttatcgccctgatccgcaaaccg
gagctgagtgacgaaaaactgctggagctgatcccagggcccgacttccccacaggcggt
gaagtactgatcagctcaggcctgcgggacacctacctgcatggacgcggcagcatcccg
atgcgcggcgtggcccacaccgaagaagtgcaaccgggcaaaggacgccacaaacgcaat
gccgttgtcgtcaccgaactgccgtaccaactcagcaaggccggctggattgaaaaactg
gcggagtccgtcaacgacggaaaaatcggcggaattgccgacatccgcgacgaaagcgac
cgcgaaggaatgcgtgtggtggtggagctgcgtcgcgatgcagatcctgagaatgtgctg
aaggatttgcaacggcgaacggcactgcagagcaacttcggagccatccttctcgccctg
gtggatggacaaccccagcaactgtcgctgcgccaactgctgcagaccttcctcgatttc
agggaactgaccctgatccggcgcaccagtcatgccctacgcaagaccgaagaccggctt
gaggtggtggaaggactgatctcagccctgaacaaccttcaggctgtgatcgccatgatt
caggaggcgaatgacgccgcctcagcccgcgccagcctgatggtgcgcctcgacctcagc
gaacggcaggcggatgcggtgttggccatgcccctgaggcgcctgaccggactcgaacag
gaaagcctgcgccaggagctggatgagcttcgagcagaacgccaacgcctgaagttgctc
ctcgacaaccgggatcagctgctggacgcgatggtgacggagctcaaggcgttgaaaaaa
cgcttcagcaccccgcggcgaacccgcctggtagagggcggtgatgccctgatggccgaa
cgggcagccagccaacggccgaacacggaactgctgcgtcagcaggccttggctgcactg
cccggagatggtcgggtgctgatccaggccgatggccaagtgaaaatcgtcaccccccag
gtgctgggccgactgcacctcaatgatccttgccccattggtgatgcaccatctccggca
cgggtgatcctgccgatcgagccaccaccacgactgttggcggtgagtgcaaggggacgc
atcgcccaggtgcgctgggaatttgctggacagcaacccggtccgattgaccgattcctg
cccacgggcctcgacggagaccccatcgtttcgctgctgtcgctgcccagccaaaacatt
gacaatctgagtctgggcttgctcagcagcgatggacgctttaagcggctccccctcagc
gaaattgtggacctttccggtcgggccactagcgttcttaagttgaaagagggagtcgag
ctcaatagtgcagtgatctgccgcgaccagggaacactggcgctgatcagtgacatcggt
cgcctgctgcggctgcgagtcactgaagattcacttccgttgatgggtcgattggcgcag
ggacccatgaccatgcgattgctcccaggggaacatatcgttggagccgtctgcacggaa
cagacaccactgatgctgatcaccaggcagggaatgatcgggcgaatcgactattcaggc
ctgcgctacaaccaacggggcgatctcggcagcatggcgctgcagattgatgcggaatct
gatcgtctggtgggcatcagcactggacccggtcttgttggtgtgcgcaccagcaaggat
cgtcacggacgattggatccggacaacatcaacgtctcaaaacccggagacaaacctacg
gagcaggcgtctcttcaaaagggagaggccatcgttgatgtgatcaacgccattcaaccg
aatccctaa
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