Synechococcus sp. WH 8109: Syncc8109_0180
Help
Entry
Syncc8109_0180 CDS
T03783
Name
(GenBank) putative polyA polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
syh
Synechococcus sp. WH 8109
Pathway
syh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Syncc8109_0180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syh03019
]
Syncc8109_0180
Enzymes [BR:
syh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Syncc8109_0180
Messenger RNA biogenesis [BR:
syh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Syncc8109_0180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
Motif
Other DBs
NCBI-ProteinID:
AHF62598
UniProt:
W0GUC5
LinkDB
All DBs
Position
170753..171895
Genome browser
AA seq
380 aa
AA seq
DB search
MTRLALVGGVVRDLLLHHLHGVPWAGVPDLDWVVEGDALALTDVLMQRCGSQRVTDVQHY
GAYGTVALRFDGIPVDLASARREIYPAPAQNPKVEPGTLEQDLLRRDFTINAMAIDLMAE
QLVDFHSGQRGLTDKQLTLLHDHSIRDDPTRVIRAARYAARLGFTLDEKTQDQITRTIQA
WPWAWSTSASATAAPPALSTRLRMELHRLFQHEPWAQAIACLQEWQALSLIDPSLQGDPL
LMRRLHWAQRLELPLVLALVSGTRHPLRVAQRLQLPGQEQQWLRQMLDLKQWLLADAPRV
SSLPSVWSEALEARGAKAESVALLICLMPVQWKPLLRWWGRWRKIKSPKTARQLLDSGWS
SGPALGQELNRLRHEAQDKS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcggctagccctcgtgggtggagtggtccgagatctgctgctgcatcacctgcat
ggtgttccatgggccggtgttcccgatctggattgggttgtcgagggggatgctctggcc
ctaacggacgtgctgatgcagcgctgtggttcgcagcgggtcacggatgtgcagcattac
ggggcttacgggacagttgcactgcgcttcgatggaatccctgttgatttggcgtcagcc
cggcgggagatctacccggctcctgctcagaatcccaaggtggaacccggcacgttggag
caggatcttctccggcgggatttcaccatcaatgccatggctattgatctcatggctgag
cagttggttgatttccattcgggtcaacgcgggttgaccgacaagcaattgacactgctg
catgaccacagcattcgggatgaccccacgcgcgtgatcagggcagcgcgctatgcggct
cggctggggttcacgttggatgaaaaaactcaggaccaaatcacccgaaccattcaggcc
tggccctgggcttggtccaccagcgcttcagccacggcggccccaccggcgctctcgacc
cgtctgaggatggaactccaccgtttgttccagcatgaaccttgggcacaggccatcgct
tgtctgcaggaatggcaggcgttgtcgctgattgatccgagcctgcagggcgatccgcta
ctgatgcggcgtctgcactgggctcagcggctggagcttccccttgtgctggctttggtg
tccggtaccaggcatccgttgcgcgttgcgcagcgacttcagcttccgggtcaggagcag
cagtggttgcgccagatgctggatttgaagcaatggcttctggcggatgccccgcgtgtg
tcgtcgctcccgtcggtttggtcagaggccttggaggcacgtggtgcgaaggctgaaagc
gtggctctgctgatctgcctgatgccggttcaatggaaaccccttttgcgctggtggggg
cgctggcggaagatcaaatcgccgaagaccgctcgtcagctcctggactctggctggagt
tctggtcctgctttgggacaggagttgaacaggctccgccatgaggctcaggacaagtcg
tga
DBGET
integrated database retrieval system
