Synechococcus sp. WH 8109: Syncc8109_0205
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Entry
Syncc8109_0205 CDS
T03783
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syh03400
]
Syncc8109_0205
Enzymes [BR:
syh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Syncc8109_0205
DNA repair and recombination proteins [BR:
syh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Syncc8109_0205
Prokaryotic type
Syncc8109_0205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AHF62620
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Position
193242..194675
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AA seq
477 aa
AA seq
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MTSSRVLFWHRRDLRLADNLGLVAATDISPAVTGVYVLDPQLINPTEHLPPMAPARLWFL
IESLVELQQRWREAGSRLLVVKGDPVAVLPQLAQQIGAEAVVWSRDVEPYARERDRQVAK
KLQADGRKVVVDWDQLLIAPELLKTGGGDPYRVYGPFLRNWRGQVLAKQPSTVAAPTGLV
DLDPAQLPALESLEALRESHGFKGAEICPCRPGEAAALAQLNSFCDGPLLAYEPDRNFPG
TAGTSYLSAALSVGTLSPRQAWCAAQDSREQARSEEHLQAIAVWEQELGWREFYQQALFH
FPELADGPYREKWHRFPWENNEDWFDFWKEGQTGMPIIDAAMRQLNQTGWMHNRCRMIVA
SYLVKDLICDWRWGERAFMELEVDGDLAANNGGWQWSASSGMDPKPLRIFNPATQASKFD
SAGDYIRQWVPELRHVNTKDLLSGEIGALERRDYPEPLVDHKKQQARFKALYATLRS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgactagctctcgcgttctgttttggcaccgccgcgacctgcgcctggcggacaacctt
ggtttggtggctgctacggacatcagtccggcggtgacgggggtgtacgtgctcgacccg
cagctgatcaacccgacggagcatctgccgccgatggcgccggcccggctttggtttctg
atcgagagcctggtggaactgcagcagcgctggcgggaggccggtagccgattgctggtc
gtcaaaggtgacccggtggcggtattgccgcagctggcgcagcagatcggtgccgaagct
gtggtgtggagccgcgatgtggagccctatgcccgtgagcgggaccgccaggtggccaaa
aaactgcaggccgatggccgcaaggtggtggtggattgggatcagctgctgatcgctccg
gagctgctcaagaccggaggtggtgacccataccgcgtctatggcccgttcctgcgcaac
tggcgcggccaggtgctagctaagcaacccagcaccgttgcggcccccaccgggctggtg
gatcttgatcctgctcagctgccggcccttgagtccttggaggctctgcgggagagccat
ggtttcaagggcgccgagatctgtccctgtcgccctggagaagcggcggcgctggcccaa
ctcaacagcttctgtgatgggccgctgctcgcctatgagcctgaccgcaatttccccggt
accgcaggcacctcttacctcagcgctgccctgagcgtcggcacgctcagcccgcgccag
gcctggtgtgccgcccaggactcccgtgagcaagcccgcagcgaggagcacttgcaggcc
attgcagtgtgggagcaggagctgggctggcgagagttttaccagcaggctctgtttcat
ttcccggaactggccgatggcccctaccgcgagaagtggcaccgcttcccctgggagaac
aacgaggattggttcgacttctggaaggaggggcagaccggcatgccgatcatcgatgcc
gccatgcgccagctcaaccagaccggctggatgcacaaccgctgccgcatgattgtggcc
tcctatctggtcaaagacctgatctgcgactggcgctggggcgagcgcgccttcatggaa
cttgaggtggacggtgacctggccgccaacaacggtggttggcagtggagcgccagcagt
ggcatggatcccaagcccctgcgcatctttaaccctgctactcaggcctccaaattcgat
tcagccggcgactacatccgccagtgggttccggagctccgccatgtgaacacaaaggat
ctgctaagcggtgagatcggagccctggaacggcgcgactatcccgaacctctggtggat
cacaagaagcagcaggctcggtttaaagcgctctacgccaccctccggtcctga
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