Synechococcus sp. WH 8109: Syncc8109_0275
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Entry
Syncc8109_0275 CDS
T03783
Name
(GenBank) putative soluble lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syh01011
]
Syncc8109_0275
Enzymes [BR:
syh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Syncc8109_0275
Peptidoglycan biosynthesis and degradation proteins [BR:
syh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Syncc8109_0275
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_6
TPR_14
SLT_2
TPR_19
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AHF62686
UniProt:
W0GVX9
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All DBs
Position
complement(252841..254976)
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AA seq
711 aa
AA seq
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MGVQAGPRIGTLLLLSVAGFSGLTAWGGQLLLNKQHQRLTPEVSQARLWQHYRWAIDPQT
RREAALLMVARDGSPQLLHGQGWGRDPMAAVVLERAALTAAAQGKPSDAAETWQLLLDRF
PEAPGSAWARLALGNKKPVLHQQLLQQQPAHPAALTLAARDGSKALASHQGALHLARWNS
RRAGALGLMRDACQATGAQAPQPDQREILAQALAKQGHADTALTCLKELEASPETQLAIG
HSLLLHGNPGAGTARLLTLAQSHPNHPASLEAARILSEPLDAQPGVLDALPAALEERSAA
VAAARVRLAGGDGADAALSRWPNNPDIWQLQWDLAREAFLAGDWDRARTLLERPDEDGPL
PPPLETRRLFWLGLSHKQLGETTKAERTWRRLIGVFPGGYYRWRAMEQLDMAEPLALRSP
DPQQEPPAWQPLNSHHRLVNELWRLGQVHAAWEAWQAQADPAVPTPPEERLAEGRLRLAV
GDTWMGLDQLWWLSLRWREPSCHQRTLLHRSQFPRLFEAEIQTAAEQAGIQANLLRAIAK
QESRFAPGVVSPAGAVGVMQLLPSTATEMADAPTSTAMLKDPADNFELGARYLNHLLEQW
ENDPFRSIASYNAGPGAVASWAQPTDQVDDELWVERIPYPETRFYTKKVLDNLLGYLGGK
QSFCKESGGGVGQKRAGDDASDHDQTHQKQANPGGGQNTDADEIEPGQQHG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgggtgtgcaggcaggcccgcgaatcggaacgctgctgctgctttcggttgctggtttc
agtgggttgactgcatggggcgggcagctgctactgaacaagcagcatcagcgcctcacg
cctgaggtctcgcaggcaaggctctggcagcactaccgctgggccatcgatccgcagacc
cgtcgagaggccgccctgttgatggtggccagggatgggtcaccgcaactgctccatggc
caaggctgggggcgcgatccaatggcggccgtggtgctcgaacgtgcagccctcaccgcc
gccgcccagggcaagccatcagacgcggctgagacctggcagctcctgttggatcgcttt
cccgaagcacccggctccgcttgggctcgattggcgcttggcaacaaaaagcccgttctt
caccagcagctgctccaacagcaaccggcgcaccccgcagcactgaccttggcggctcgg
gatggctccaaagcgctggcaagccatcaaggcgccctgcacctggcccgttggaattcg
cgccgagccggcgcccttgggctgatgcgtgacgcctgccaggccacgggagcgcaggca
cctcaacccgaccaacgcgaaatcttggcgcaagcactggcaaaacaaggtcatgccgac
accgcactgacctgtcttaaggagcttgaggcctccccagagacccagctagccatcggt
cattccctgctgctgcatggcaaccctggtgcaggtacagcccggctgctaaccctggcg
cagagccacccaaaccaccccgccagccttgaagcagcaaggatcttgagcgaaccgctc
gatgcccagcctggagtgctggatgcccttccggctgcccttgaggagcgctcagccgct
gtcgccgcagctcgcgtgcgactcgccggcggcgatggggcggatgccgccctgagccgc
tggcccaacaaccccgacatctggcaactccaatgggacctcgcccgcgaggcatttctg
gctggagattgggatcgtgcccgcaccctgctggaacgccccgatgaggatggccccctc
ccaccaccattggagacgcggcggctgttctggttggggcttagccacaagcaactcggc
gagacgacgaaggcagaacgcacctggcgccgcctgatcggggtcttccccgggggctac
taccgatggcgcgccatggagcagctggatatggccgaacccctggcgttgcgatcccca
gacccgcagcaggagccaccagcctggcaaccgctcaacagccatcaccgcctggtaaat
gagctttggcgcctaggccaggtgcacgccgcctgggaggcctggcaggcccaggccgat
cctgccgtcccgacgccacccgaggaacgtctcgccgaaggcaggctgcgccttgccgtc
ggggacacctggatgggactggaccagctctggtggctcagcctccgctggcgtgagccg
agctgccatcaacggactcttctgcatcgcagccaattccctcgcctcttcgaagctgag
atacagacagcggcagagcaagcaggcattcaagccaatctgctgcgagcgatagccaaa
caggaatcacgctttgctcctggtgtcgtctcccctgctggggccgtaggggtgatgcaa
ttgctgccctctacggccacagagatggctgacgcaccaaccagtacggcaatgctgaag
gatcccgccgacaacttcgaactgggcgcgcgctacctcaaccacctgctggagcaatgg
gagaacgacccctttcgcagcattgccagttacaacgccgggcctggtgctgtggcctct
tgggcgcaacccacggatcaagtcgacgatgagctctgggtggaacgcattccctacccg
gaaacacgcttctacaccaagaaagtgctggacaatctgctcggctacctaggcggcaaa
caatcgttctgcaaagagagtggcggtggggtggggcagaagcgtgccggcgacgatgcc
agcgatcacgaccaaactcatcaaaagcaggcaaatcccggcggcgggcagaacaccgat
gcggatgagatcgagcctggccaacagcacggctga
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