Synechococcus sp. WH 8109: Syncc8109_0406
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Entry
Syncc8109_0406 CDS
T03783
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
syh
Synechococcus sp. WH 8109
Pathway
syh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Syncc8109_0406 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syh03400
]
Syncc8109_0406 (recF)
DNA repair and recombination proteins [BR:
syh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Syncc8109_0406 (recF)
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Motif
Pfam:
SMC_N
AAA_21
AAA_15
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AHF62810
UniProt:
W0GRL1
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Position
complement(361406..362443)
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AA seq
345 aa
AA seq
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MVIGPNGIGKSNLLEAVELLGSLRSHRCSNDRDLIQWDAPEALIRADVGGGDRLELKLRR
HGGRQAKRNGKLLDRQLDLIGPLRCIGFSALDLDLVRGEPALRRQWLDRVVLQLEPVYAD
LMARLNRLLRQRSQLWRQRQVSSGERHALLDAFDVQMALVSTRIHRRRQRALHRLEPIAQ
RWQAHLSGGTEALELHYKPGSKLDGEDAEEPWRLAIEEQLRQQRGEEERLGSCRVGPHRD
EIALLLGGSPARQFGSAGQQRSLVLGLKLAELELVTQLCGEPPLLLLDDVLAELDPTRQQ
LLLEAVGESHQCLVSATHLEGFGGGWQQQAQILGARDLRPDLKIR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
ttggtgatcgggcccaatggcattggcaagtccaacctgctcgaagcggttgagctgctg
ggcagcctgcgctcccatcgctgcagtaacgatcgcgatctgatccagtgggacgctcca
gaggccctgatccgggccgacgtggggggtggggatcgtctggaactgaaactgcgccgc
catggaggccgtcaggccaaaaggaacggcaagctgctcgatcggcagctggacctgatt
ggtccactgcgctgcattggcttcagcgccctggatcttgatctggtgcggggcgaaccc
gccttacgccgccagtggctggaccgcgtcgtgctgcagctcgaaccggtgtatgccgat
ctgatggcgcggctgaaccggttgctgcggcagcgcagccagctctggcgccagaggcag
gtctccagtggcgaacgccatgcgctactcgatgcctttgatgttcagatggcgctggtg
agcacccgaattcaccggcgacggcaacgggccctgcatcggttggaaccgatcgcccaa
cgctggcaggcccacctcagcgggggcacagaagccttggaactgcactacaaacccggc
agcaagctcgacggggaggatgccgaagaaccctggagactcgccatcgaggagcaactg
cgccagcagcggggagaggaggaacggctcggcagctgccgcgtgggcccgcaccgcgat
gagatagccctgctgctggggggcagcccggcacgacagtttggctccgcaggccagcag
cggtcgctggtgctgggcctgaagctcgccgaactggagctggtgacccagctctgcggg
gagcctcctttgctgcttcttgatgatgtgctcgccgaactggatccaacccgtcagcag
cttctgcttgaggccgtgggggaatcgcatcaatgcctggtgagtgccacccacctcgag
ggctttggcggcggatggcagcagcaggcccaaattctcggagcaagagacctgagaccc
gacctgaagatcagataa
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