Synechococcus sp. WH 8109: Syncc8109_0468
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Entry
Syncc8109_0468 CDS
T03783
Symbol
apcE
Name
(GenBank) phycobilisome linker polypeptide
KO
K05379
phycoerythrin-associated linker protein
Organism
syh
Synechococcus sp. WH 8109
Pathway
syh00196
Photosynthesis - antenna proteins
syh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
Syncc8109_0468 (apcE)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
syh00194
]
Syncc8109_0468 (apcE)
Photosynthesis proteins [BR:
syh00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycoerythrin (PE)
Syncc8109_0468 (apcE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PBS_linker_poly
CpcD
WetA_C
Motif
Other DBs
NCBI-ProteinID:
AHF62868
LinkDB
All DBs
Position
complement(407598..409244)
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AA seq
548 aa
AA seq
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MASTQSSLGFGTTTKWSDPVRFQRKGVAKTAALTIGEFLKQSCDQMANGVGPRTHEDCPH
RVTSECYSPEDVASLETVISASYRQVFGNAHVMDFERCSELEAQLRDGRLTVREFVRGLA
KSSFYKDRFFRSVAPQRGVELTFKHLLGRAPETQAEISAKIALQAEHGHNGLVDSIVDSA
EYLEVFGSDVVPYARSWSSPADLSTAAFPMLAALQKSFAGSDSARGGSPALTRSLANGVA
PRISLPSQPIGLRPSSGSFTATQFSSKAPGITSGKDSAPMRGDVYVTFGLGQREQETFQR
CPGDGPDQLAALIRSTYKQVMGNPHLMEFERVISAESKFIDGYLSTREFVRAVGLSAEYK
RRFFETSAPYRFIELNFKHFLGRAPRSQAEISEHTKILAEGGYEAEISSYVDSAEYQNTF
GEDTVPFARILTESGRSQVDFNRQLSLAEGYAASDTVLGTSALVSSVATGLAPSGWSKTT
SRANRTGTQSGAPDPTKKRFRIVVASQAARSRQRTAGNSYVVSGKDMSSQMKYIHARGGK
IVSITEVM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggccagcacacaatcttctcttggcttcggcacaaccaccaagtggagtgatcccgtt
cgcttccagcgcaagggggtagccaaaaccgctgccctcaccattggtgagttcctgaag
cagtcgtgtgatcagatggcgaatggggttggtccacgcactcatgaggactgcccccat
cgcgtcacgagcgagtgctatagcccagaagatgtggcgtcactggaaacggtaatcagt
gcgtcatatcgacaggtttttggcaacgcccacgtgatggatttcgagcgttgctcggaa
ttggaagctcagcttcgggacggtcgtttgaccgtgcgtgaattcgttcgtggtctggcc
aagtccagtttctacaaggaccgtttcttcagaagcgtggccccacagcggggtgtcgag
ctgacgttcaagcacctgttgggccgagcacctgaaacacaggccgagatctcagcgaaa
atcgccctgcaggcagaacacggtcacaacggcttggtagacagcatcgttgactccgcg
gagtacctcgaagtcttcggtagcgacgtggtgccctatgcgcgttcatggagttcgcca
gcagacctatcaacagcagccttcccaatgctggccgctcttcaaaagagttttgccggc
agtgatagtgcccgcggcggaagtcctgcgctgacgcgcagcctcgcgaatggagtggct
ccaaggatcagcctgccaagtcagcccatcggtctgcgtccctcctctggaagtttcacg
gccacgcagttcagcagcaaggcacctggtatcacctcaggcaaagactctgcgcccatg
cgtggtgatgtgtatgtcaccttcggcctcggccagagagagcaagaaactttccaacgt
tgccctggtgacggcccggatcagctcgccgcgctgattcgttccacctacaaacaggtg
atgggcaatccccatctgatggaattcgagcgggttatctctgcggaaagcaaattcatc
gatggctatctgagcacacgtgaattcgttcgtgctgtgggcctttcagccgaatacaag
cgtcgtttcttcgaaaccagcgcgccgtatcgattcatcgaactgaacttcaaacatttc
ctgggaagagcgccacggtcccaagccgaaatcagcgaacacaccaagatccttgccgaa
ggtgggtatgaggctgaaatctccagctatgtcgatagcgctgaatatcagaacaccttt
ggtgaagacacagttccgttcgctcgaatcctcaccgaaagcggccgctctcaagttgac
ttcaaccgtcaactgagcctggcagaagggtatgccgcaagcgatacggttctcggcacc
tccgctttggtgagttcggttgcgacagggctcgcgcccagtggctggagcaaaaccacc
agccgggcaaaccgaactggcactcaatctggcgcacctgatcccaccaagaagcgtttc
cgcattgttgttgcttctcaggctgctcgttcgcgtcaacgcacggctggtaacagctac
gtcgtgtccggaaaagacatgagcagccaaatgaagtacatccatgcacgcgggggcaag
atcgtttccatcactgaggtgatgtaa
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