Synechococcus sp. WH 8109: Syncc8109_0748 Help Entry Syncc8109_0748    CDS       T03783                                  Symbol rpoD Name (GenBank) Sigma-70 factor   KO K03086   RNA polymerase primary sigma factor Organism syh  Synechococcus sp. WH 8109 Brite KEGG Orthology (KO) [BR:syh00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     Syncc8109_0748 (rpoD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:syh03021]     Syncc8109_0748 (rpoD) Transcription machinery [BR:syh03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      Syncc8109_0748 (rpoD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 Menin Motif Other DBs NCBI-ProteinID:  AHF63128 LinkDB All DBs Position complement(602761..604137) Genome browser AA seq 458 aa AA seqDB search MTPAATKAAKPDIVLLANADGKVKEVAKGSDEEAKKTPARRRTSKASAKDLSAAADELLA AADQAKASGTTKKAAAKTTKTKTTTKKSTTTKKAATAKKSATKASTAKAAAAKPTAEEKA KTAAAEKEAKAKALASIKIGPKGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLY LEELAAQFESDNGREPDNKEWAALVEMPLIRFRRRLMLGRRAKEKMVQSNLRLVVSIAKK YMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLP VHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGK EEDSRLGDFIEADIENPEQDVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLE EIGQIFDVTRERIRQIEAKALRKLRHPNRNGVLKEYIK NT seq 1377 nt NT seq  +upstreamnt  +downstreamnt atgacccctgctgccaccaaagctgccaagccggacatcgttcttctggccaatgctgac ggcaaggtgaaggaagtcgccaagggttccgacgaagaggccaagaaaacccctgcacgc cgacgaaccagcaaggcgagcgccaaagacctcagcgccgcagccgacgaacttctcgcc gctgcagatcaagccaaagcttcgggaaccaccaaaaaggctgcagcgaaaacaaccaag accaaaaccacaacgaaaaagtccaccacaaccaagaaggcagccaccgccaagaagagc gccaccaaggcatcaacagccaaagcagcagcagcgaaaccaaccgccgaggagaaagcc aaaacagcagccgctgagaaggaagccaaggcaaaagccctggccagcatcaagatcggc cccaaaggcgtttacaccgaagactccatccgggtttatctgcaggaaatcggtcggatc cgcctgctgcgtcccgacgaagagatcgaactggcccgcaaaattgccgatcttctttat ctcgaggaactggccgctcaatttgaaagcgacaacgggcgggaacccgacaacaaggag tgggcggccctggtggaaatgccgctcatccgcttccgccggcgcttgatgctgggcaga cgggccaaggaaaaaatggtgcaatccaacttgcgcctggtggtctcgattgccaagaag tacatgaatcggggcctgagcttccaagacctgattcaggaaggaagccttggcctgatt cgtgcagccgagaagttcgaccacgaaaagggctacaagttctccacctacgccacatgg tggattcgccaggccatcacacgcgccatcgccgaccagagccgcaccatccgcctgcca gtccacctctacgaaactatctccaggatcaagaagaccaccaaggttctctcccaggaa ttcggccgcaagccaacggaagaggaaatcgcggaatcgatggaaatgaccatcgaaaaa ctgcgcttcatcgccaagagtgcccagctgccgatctccctggagacccccatcggcaag gaagaggattcccgcctgggcgatttcatcgaagccgacatcgagaatcccgagcaggac gtcgccaaaaacctgcttcgtgaagacctggaaggagttttggccaccctcagcccccgc gagcgcgatgtgctgcgcctgcgctacggcttggacgacgggcggatgaagaccctcgag gaaattggtcagatttttgatgtgacccgtgaacggatccgtcagatcgaagccaaggcc ctgcgcaaattgcgccaccccaaccgcaatggggtcctcaaggaatacatcaagtaa

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