Synechococcus sp. WH 8109: Syncc8109_0960
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Entry
Syncc8109_0960 CDS
T03783
Symbol
crtH
Name
(GenBank) carotenoid isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
syh
Synechococcus sp. WH 8109
Pathway
syh00906
Carotenoid biosynthesis
syh01100
Metabolic pathways
syh01110
Biosynthesis of secondary metabolites
Module
syh_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Syncc8109_0960 (crtH)
Enzymes [BR:
syh01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
Syncc8109_0960 (crtH)
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GFIT
Motif
Pfam:
Amino_oxidase
DAO
NAD_binding_8
FAD_oxidored
FAD_binding_2
HI0933_like
Pyr_redox_2
Thi4
GDI
GIDA
FAD_binding_3
Lycopene_cycl
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AHF63334
UniProt:
W0GXM8
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Position
745289..746845
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AA seq
518 aa
AA seq
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MSENQQWDAVVIGSGIGGLVTASQLAAKGAKTLVLERYLIPGGSGGAFKREGYTFDVGAS
MIFGFGKKGFTNLLTRALTDVGEHCDTIPDPAQLEYHMPGGLRIAVDRDYEQFIADLTAR
FPHEAKGIRRFYDTCWQVFNCLDAMPLLSLEDPAYLTKVFFKAPLACLGLARWLPFNVGA
VAREHIKDEQLLKFIDIECFCWSVMPADRTPMINAGMVFSDRHAGGINYPKGGVGVIAEK
LVKGLERHGGAIRYKARVTEVLIENDQAVGVKLADGEVIRAKRVISNATRWDTFSGVGDD
QRRSGQALVDAAHTPGKEQFWRKRYVPSPSFLSLHLGVRADLIPAGTHCHHLLLEDWNRM
EDEQGVIFVSMPSLLDPDLAPAGHHIVHTFTPSSMEAWQGLTPSQYREKKEADAARLIQR
LESILPGLADAITHKEIGTPRSHRRFLGRFQGSYGPIPAMQLPGLLPMPFNRTGLKNLYC
VGDSCFPGQGLNAVAFSGFACAHRVGADLGLNPWALPA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaaccagcagtgggatgccgttgtgatcggttccggcatcggtggtttggtc
accgccagtcagttggcggccaagggagccaagactctcgtcttggagcgctatctgatc
cccggcggcagtggtggtgccttcaaacgcgagggctacacctttgatgtgggggcctcg
atgatcttcggcttcggcaagaaaggtttcaccaacctgcttacccgggcccttactgat
gtgggggagcactgcgacaccatccctgaccccgcccagctcgagtaccacatgcccggt
gggctgcgcatcgccgtggatcgcgactacgagcagttcatcgccgatctcacggcgcgg
tttccccatgaggcgaagggtattcgccgcttctatgacacctgctggcaagttttcaat
tgcctcgatgcaatgccgcttctctcactggaggatccggcttatctcaccaaggtgttc
ttcaaggcaccactggcctgtctggggctggctcgctggctgccgttcaacgtcggtgcg
gtggcccgcgagcacatcaaggacgagcagctgctcaagttcattgacatcgagtgtttc
tgctggtcggtgatgccggcggaccgcacgccgatgatcaatgccggcatggtgttttcc
gatcggcatgcgggcgggatcaactaccccaagggaggcgtcggcgtgatcgctgaaaag
cttgtgaagggattggagcgtcacggcggcgccattcgctacaaggcccgagtcaccgag
gtgttgatcgagaatgatcaggcggttggcgtgaagctggccgatggcgaggtcattcgc
gccaagcgtgtgatctccaatgcaacccgctgggacaccttctcgggagtgggtgatgat
cagcgccgctccggccaggccctggtggatgctgcccacacgccgggcaaagagcagttc
tggcggaagcgttatgtgccttccccctcgttcctgtcgctgcatttgggggttcgggct
gacctgattccggccggcacccactgccatcaccttctgctcgaagactggaaccggatg
gaggacgaacagggggtgatcttcgtgtcgatgccctcgctgctggatccggatctggcc
ccggcggggcatcacatcgttcacaccttcacgccctcatcgatggaggcctggcaagga
ctgacccccagccagtaccgcgagaaaaaggaggcggatgcggcacggttgatccagcgc
ctggagtcgatccttcccggcctcgccgatgccatcacccacaaggagatcggtacgccc
cgcagccaccggcgttttctgggtcgctttcagggcagttacggcccgattccggcgatg
caactgccaggactgctgccgatgccgttcaaccgcacgggattgaaaaacctctactgc
gtgggtgattcctgtttccccggccagggactcaacgctgttgccttcagtgggtttgcc
tgtgcccatcgggttggggccgacctcggcctgaacccctgggcgctgccggcctga
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