Synechococcus sp. WH 8109: Syncc8109_0998
Help
Entry
Syncc8109_0998 CDS
T03783
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
syh
Synechococcus sp. WH 8109
Pathway
syh00300
Lysine biosynthesis
syh00470
D-Amino acid metabolism
syh01100
Metabolic pathways
syh01110
Biosynthesis of secondary metabolites
syh01120
Microbial metabolism in diverse environments
syh01230
Biosynthesis of amino acids
Module
syh_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Syncc8109_0998 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Syncc8109_0998 (lysA)
Enzymes [BR:
syh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Syncc8109_0998 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHF63372
LinkDB
All DBs
Position
complement(778668..780047)
Genome browser
AA seq
459 aa
AA seq
DB search
MTQTITSQRPFEANRDAESPNRNLTPITTELDGTDRLVVGGCRLSDLAERYGTPLYVLDE
ATVRATCRAYRQALEKHYAGPSLPIYASKANSSLVMSSLAASEGLGLDAVSAGELLTALH
GGMPGERMVLHGNNKSDEELLLAYANKVTIVVDNQHDLDRLAELVPAGAEPARLMLRFTP
GIECHTHEYIRTGHLDSKFGFDPDQVEPVLRSLVGQPWSQLTGLHAHIGSQIFELEPHQD
LAAVMADKLKLARDLGHPVSDLNVGGGLGIRYVESDDPPSIEQWIQVVAEAVTSACQERG
LELPRLMCEPGRSLVATAGVTLYSVGSRKTIPNVRTYVAIDGGMSDNPRPITYQSLYTCC
LADRPLAKPDESVNLVGKHCESGDVLLKNLALPTTESGDIVAVFATGAYNASMSSNYNRI
PRPAAVLVHDGAAELVQKREQPDDLLRYDVLPERFNALR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaaaccatcaccagtcaacggcccttcgaggccaaccgggatgcggagagcccc
aatcgcaacctgaccccgatcaccacagaactcgacggcaccgaccgtcttgttgtaggc
gggtgtcgtctcagcgatctggccgagcgatacggcacaccgttgtatgtgctggacgaa
gccaccgttcgggccacgtgccgggcctaccgccaggccctggaaaagcattacgccggg
ccatccctaccgatctacgcctccaaggccaacagctccctggtgatgagcagccttgcg
gcctctgaggggctgggtctagatgcggtgtcagccggtgaactgctgaccgcactgcat
gggggaatgcccggggagcgcatggtgctgcacggcaacaacaaatccgacgaggagctg
ctgctcgcctacgccaacaaggtgacgatcgttgtggacaaccagcacgatctcgatcgc
ctcgccgaactggtgcccgctggagccgaaccggctcgcctgatgctgcgcttcaccccc
ggcatcgagtgccacacgcacgaatacatccgcaccggtcacctggacagcaagttcggc
ttcgatcctgaccaggtggaacccgtactccgcagcctggtgggacagccctggtctcaa
ctcaccgggttgcacgcccacatcggatcccagatttttgaactcgagccccaccaggat
ctggcggcggtcatggccgacaagctgaagctggcccgtgacctggggcatcccgtgagc
gacctcaatgtgggcggtggcctgggcattcgctacgtggagtcagacgaccccccgagc
attgagcagtggatccaggtggtggccgaagccgttaccagcgcttgtcaggaacgggga
ctcgagctgccgcggttgatgtgcgaaccgggccgttccctggtggcgaccgccggcgtg
accctgtattcggtgggctcgcgtaaaacgatcccgaatgtgcgcacctacgtggccatt
gacggtggcatgagcgacaaccctcgcccgatcacctaccagtcgctctacacctgttgc
ctggccgatcgccccctggccaagccagacgaaagcgtgaacctggtgggaaagcactgc
gaatccggcgatgtgttgctgaagaacctggccctgcctaccactgagagcggtgacatc
gtcgccgtgtttgccaccggcgcctacaacgcctcgatgagttcgaactacaaccggatc
ccgaggcccgctgccgttctggtgcacgacggagcagctgaactggtgcagaagagggag
cagccggatgacctgctgcgctatgacgttttgccagaacgattcaacgcgttacgttga
DBGET
integrated database retrieval system