Synechococcus sp. WH 8109: Syncc8109_1000
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Entry
Syncc8109_1000 CDS
T03783
Symbol
clpC
Name
(GenBank) ATPase
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
syh03110
]
Syncc8109_1000 (clpC)
Chaperones and folding catalysts [BR:
syh03110
]
Heat shock proteins
HSP100
Syncc8109_1000 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
TniB
Sigma54_activat
nSTAND3
AAA_14
Zeta_toxin
AAA_18
ATPase_2
NACHT
UVR
AAA_28
IstB_IS21
ResIII
TsaE
Torsin
AAA_25
DNA_pol3_delta2
NBD_SMAX1
DAHP_snth_FXD
Motif
Other DBs
NCBI-ProteinID:
AHF63374
UniProt:
W0GXR9
LinkDB
All DBs
Position
780743..783283
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AA seq
846 aa
AA seq
DB search
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR
VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA
ARVLENLGVDLAKVRTQVIRMLGETAEVTAGGGGGGAKGSTKTPTLDEFGNNLTQLATEA
KLDPVVGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEDK
RVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAA
NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVNVGEPSIDDTIEILRGLRER
YEQHHRLKITDDALVAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLLNSKLPPAAKEVD
KELRSVQKQKEDAVRDQDFTKAGELREKEVELREQIRSLLQANKDEVKADATSGSGETVS
AESSASDSSPMVNEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHKRLIGQDEAVKA
VSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFME
RHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRL
TDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGESAEESQYTRIRSLVNEELKQ
YFRPEFLNRLDEIIVFRQLNRDEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEG
YNPAYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDHAEVDVDENKKVVVRHKGQVDTAPQ
LAGASV
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacgcttcaccgagaaggccatcaaggtgatcatgctggcccaggaagaggct
cgcagacttggtcacaacttcgttggtaccgaacaaatcctcctcggcctgatcggcgag
ggaacaggggttgccgccaaggtcctcaagtcaatgggcgtcaacctcaaggatgcccgg
gttgaagttgagaaaatcatcggacgtggatccggctttgtcgctgttgagatccccttc
actccccgcgccaagcgtgttcttgagctgtctctggaagaggcccgtcagcttggtcac
aactacatcggtactgaacacctactgctcggtctgatccgtgagggtgaaggtgttgct
gcccgcgtgctggagaacctcggtgtcgatctggccaaggtgcgcacacaagtgattcgg
atgctgggtgaaaccgctgaagtcaccgccggtggaggtggcggtggtgccaagggatcc
accaaaacccctaccctcgacgagtttggcaacaacctcacccagctcgccaccgaagcg
aagcttgatccggtggtggggcgtcacaacgaaatcgaccgagtcatccaaatcctgggt
cgccgcaccaaaaacaaccccgttctgatcggcgagccgggtgtcggtaagaccgccatc
gctgagggcctggcccagcgcattcagcagggcgacattcccgacatccttgaagacaag
cgcgtactgaccctggatattggtttgttggtggccggcaccaagtaccgaggtgagttc
gaagagcgcctcaagaagatcatggaggagatcaaggcggccggaaatgtcatcctcgtg
atcgacgaggtgcataccctgatcggtgccggcgctgctgagggggcgattgacgcggcc
aacatcctcaagccggccctcgcccgcggtgaattgcagtgcatcggcgccaccaccctg
gacgagtaccgcaagcacatcgaacgggatgccgccctggagcgccgtttccagccggtg
aatgtgggtgagccgtccatcgacgacaccatcgaaattcttcgcggcctgcgcgagcgt
tacgagcaacaccaccgcctcaagatcaccgacgacgcccttgttgcggccgcaaccctt
ggcgatcgctatatatcggatcgcttcctgcccgataaggccatcgacctaatcgatgaa
gcaggttcccgcgtgcgtctgctcaattcgaagttgccccccgcagctaaggaagtggac
aaggaattgcgttcggtccagaagcaaaaggaggatgccgtccgcgatcaggacttcacc
aaggccggtgaactgcgcgagaaggaagtggaactgcgggagcagatccgctctctgctt
caggccaacaaggatgaggttaaggctgacgcaacctctggatccggtgaaacagtttca
gccgaatcgtctgcttcagacagctcaccgatggtgaacgaagaggacatcgcccagatc
gttgcctcctggaccggtgttccggtgcagaagctcaccgagagcgagtcggtcaagctg
ctcaacatggaggaaaccctccacaagcgtctgattggtcaggacgaagccgttaaggcg
gtgtccaaggccatccgccgtgctcgtgtcggcttgaagaaccccaaccgcccgatcgcc
agcttcatcttctccggccccaccggtgtgggcaaaaccgagctcaccaaagctctggcg
acctatttcttcggcagcgaggaggcgatgatccgcctcgacatgtcggaattcatggag
cgccacacggtcagcaagctgatcggctcgcctccgggctacgtaggtttcaacgaaggc
ggtcagctcaccgaggcggtgcgtcgccggccttacaccgtggtgctcttcgacgaaatc
gaaaaggcacaccccgatgtgttcaacctgttgctgcagcttctggaagacggccgtctg
accgattccaagggccgcacggtcgacttcaagaacaccctgatcatcatgacctcgaac
atcggttcgaaggtgatcgagaagggtggcggcggcctcggcttcgagttctccggtgaa
agcgctgaggagtctcagtacacccgtatccgttccctggtgaatgaggagcttaagcag
tacttccggcctgaattcctcaaccgtctcgacgaaatcatcgtcttccgtcagctcaac
cgcgacgaggtgaaggagatcgccgagatcatgctcaaagaggtctttggccgcatgggc
gagaagggcatcaccctcaccgtgtccgatgcgttcaaggagcgcctggtggaggagggc
tacaaccctgcatatggcgcacgtccgctgcgtcgggccgtcatgcgtcttctcgaggat
tccctcgccgaagaggtgctgtcgggtcggatcaaggacggcgaccacgctgaagtagat
gttgatgagaacaagaaggtggtggtccgccacaaaggtcaggtggacacggcaccgcaa
ctcgccggtgccagcgtctga
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