Synechococcus sp. WH 8109: Syncc8109_1040
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Entry
Syncc8109_1040 CDS
T03783
Symbol
pcbD
Name
(GenBank) chlorophyll a/b binding light harvesting protein PcbD
KO
K08921
chlorophyll a/b binding light-harvesting protein PcbD
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
syh00194
]
Syncc8109_1040 (pcbD)
Photosynthesis proteins [BR:
syh00194
]
Antenna proteins
Chlorophyll a/b binding light-harvesting protein (PCB) - Prochlorophyta [OT]
Syncc8109_1040 (pcbD)
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Motif
Pfam:
PSII
DUF4405
Motif
Other DBs
NCBI-ProteinID:
AHF63412
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All DBs
Position
complement(816293..817216)
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AA seq
307 aa
AA seq
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MFWAGAFTLFELARYDGTLPMGEQGLILIPHLAGLGFGVGESSVIVDQQPLIAIAAFHLV
SSAVLGAAGIWHTLRAPKDLSEAEGRAQKFHFEWSDSKKLTFILGHHLIFLGLGAIAFVE
WAKRHGIYDSAIGAVRRVEPNIDLSMVWGYQANFLSISSLEDVMGGHAVLAFILTIGGVW
HIISSPFGPFKKILIYNGESILSYSLAGVALMGFVTAIWCAQNTTIYPVELYGDPLKLNF
GFSPYFSDTTALEGSDHSARAWLANTHFYLAFFFLQGHFWHALRGMGFNFKRVSEALENM
GNSKVSA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgttttgggcaggtgcattcaccttgtttgagttggcccgttatgacggaacactgcca
atgggagaacaagggctgattttgattccacatctcgccggccttggcttcggcgtaggg
gaaagctctgtaatcgttgaccaacaacccctcatcgcgatcgcagcattccatctggtt
tcatccgctgttcttggagcagctggaatctggcatacacttcgagcgcccaaggacctt
tcagaagctgaaggccgcgcccaaaagtttcactttgaatggagtgatagcaaaaagctc
acgttcatcctggggcatcacctgatttttcttggcctcggagccattgccttcgttgaa
tgggcaaagcgccatggaatttacgacagcgccatcggagctgttcgacgggttgaacca
aatattgacctcagcatggtgtggggttatcaggctaattttctctctatcagtagtctt
gaagacgtgatgggtggccatgctgttttggctttcattctcacgattggtggtgtttgg
catatcatctccagccctttcggacccttcaaaaagatcttgatctacaacggcgaatcg
atcctgtcttactcgcttgctggtgtagctctgatgggatttgtgaccgccatttggtgt
gctcaaaacacaacaatttaccccgttgagttgtatggcgatccattgaaattgaacttc
ggcttctctccctacttcagcgacacaactgctcttgaaggtagtgaccactcagcccga
gcttggctggccaatacgcacttctaccttgcattctttttccttcaaggacatttttgg
catgccttacgcggtatgggctttaacttcaagcgtgtttctgaagcgcttgaaaacatg
ggaaattccaaggtcagtgcctga
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