Synechococcus sp. WH 8109: Syncc8109_1681
Help
Entry
Syncc8109_1681 CDS
T03783
Symbol
clpB1
Name
(GenBank) ATPase
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
syh03110
]
Syncc8109_1681 (clpB1)
Chaperones and folding catalysts [BR:
syh03110
]
Heat shock proteins
HSP100
Syncc8109_1681 (clpB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_14
ATPase_2
nSTAND3
IstB_IS21
TniB
AAA_7
AAA_18
RuvB_N
Torsin
KIF9
Zeta_toxin
AAA_3
NACHT
ResIII
bpMoxR
NBD_SMAX1
AAA_24
AAA_19
T2SSE
DNA_pol3_delta2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AHF64038
LinkDB
All DBs
Position
1245213..1247801
Genome browser
AA seq
862 aa
AA seq
DB search
MQPTAEQFTEQAWAAIVAAQQLAHSARHQQLETEHLLLALLQQNGLAGRILSKAGVDVGT
FQAAVDSHLRQQPSLGSPPESVFLGRSLNSCLDRAETARDGFSDSYIAIEHLMLALADDE
RCGRQLLSQAGVDTSKLKEAITAVRGNQTVTDQNPEGTYESLEKYGRDLTAAARDGKLDP
VIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPQALQNRQLIA
LDMGALIAGAKYRGEFEERLKAVLKEVTASEGQIVLFIDEIHTVVGAGATGGAMDASNLL
KPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVNQPSVEDTISILRGLKERYEV
HHGVRIADSALVAAAVLSSRYIADRFLPDKAIDLVDESAARLKMEITSKPEEIDEIDRKI
LQLEMEKLSLGRESDSASQERLQRIERELADLGEQQSSLNAQWRKEKGAIDELSSLKEEI
ERVQLQVEQAKRSYDLNKAAELEYGTLASLQKQLLEQDAQIASEESGEKGLLREEVSEDD
IAEVIAKWTGIPLARLVQSEMEKLLQLEDDLHQRVIGQHQAVTAVADAIQRSRAGLSDPN
RPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMSEYMEKHTVSRLIGAPPGYVG
YEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGHTVDFTNTVLI
LTSNIGSQSILELASDPEQHGAMESRVNDALRAHFRPEFLNRLDDQIIFHSLRREELRQI
VTLQVERLRQRLAERKLELSLSDGAADWLANAGYDPVYGARPLKRAVQRELETPIAKAIL
AGRYSEGQAISVELEADVLALR
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccacggctgaacagttcaccgaacaagcctgggccgccatcgtcgccgcccag
caactggcgcacagcgctaggcatcagcaactggaaacggagcatctcctgcttgcgctg
ttgcagcagaacggtctggctggacgcattctcagcaaagcaggggtcgacgttggcaca
ttccaggcggccgtcgacagccatctcaggcagcagcccagtcttggctctccaccggaa
tcggtgtttctaggacgctccctgaacagctgcctggatcgcgccgaaacagcccgcgat
ggattcagtgacagctacatcgctatcgaacatctgatgctggccctggccgacgatgaa
cgctgcggcaggcaactgctcagccaagcgggcgttgacaccagcaaactcaaagaagcc
attacagctgtgcgaggcaaccagacggtgaccgatcagaacccggaagggacctatgaa
tcgcttgaaaagtacggacgagaccttacggccgccgctcgtgacggaaagctggacccg
gtgatcggtcgagacgaggagatccggcgcactatccagatcctcagccggcgcactaaa
aacaaccccgtgctgatcggcgaaccaggggtcggaaagaccgccattgttgagggattg
gcgcagcgcatcgtgaatggcgatgtgccccaggccttgcagaaccgtcagctcatcgcc
ctcgacatgggagccctgatcgccggcgcgaaataccgaggtgagttcgaggaacggctc
aaagctgtgctcaaggaggtcaccgcttcggaaggccagatcgtgctgttcatcgatgaa
atccacacggtggtgggcgctggagccaccggtggagcaatggatgccagcaatctgctc
aagccgatgctggccaggggggaactgcgctgcattggcgccaccaccctcgacgagcac
cgccagcacatcgaaaaagaccccgccttggagcgacgcttccagcaagtgctggtgaat
caaccgagcgtggaagacacgatttcaatcctgaggggcctgaaagagcgttatgaggtg
caccatggcgtccgcatcgccgacagtgccctggtggcagctgctgtgttgagcagccgc
tacatcgccgaccgctttctgccagataaagcgattgatctggtagatgaatcagccgct
cgcctgaagatggagatcacctccaaaccggaggagatcgatgaaatcgatcgcaagatc
ctgcagctggagatggagaagctctccctcggccgtgaatccgacagtgccagccaggag
cggctgcagaggatcgagcgggagctggcagacctgggcgaacaacaaagttccctgaat
gcccagtggcgaaaagagaaaggggcgatagatgagctgtcgtcgctcaaggaggagatc
gaacgggtgcagctgcaggtggaacaggccaaacgcagctacgacctgaacaaagcagcg
gaactggaatacggcaccctggcctcgctgcagaagcagttgctcgaacaggacgcccag
atcgcctcagaggagtctggcgagaaaggcttgctgcgggaggaggtgagtgaagatgac
atcgctgaggtgatcgccaagtggaccggaatccctttggcacgactggtgcagagcgaa
atggagaagctgctgcagctggaggatgacctgcatcagcgggtgatcggccagcaccag
gccgtcaccgccgtcgccgatgcaattcaacggtccagggcagggctgagcgacccgaac
cgccccatcgccagcttcctattcctcggccccactggtgtgggcaagacggaactctct
aaagccctcgccaaccggctgttcgacagcgatgacgccatggttcgcatcgacatgtcg
gagtacatggagaagcacaccgtgagccgtttgatcggggcacctcccggctacgtgggg
tatgaggccggtggccagctcaccgaagcggtgcgtcgtcggccctacgccgtgatcctg
ttcgacgaggtggagaaagcccacccggatgtcttcaacgtgatgttgcagatcctcgat
gacggccgtgtcaccgatgggcaaggccacacagtggacttcaccaacaccgtgctgatt
ctcaccagcaacatcggcagccagtcgatcctggagctggccagcgatcccgagcagcat
ggagcgatggaaagccgggtgaatgacgctctccgggcccatttccggccggaattcctc
aatcgcctcgacgatcagatcatcttccacagcctcaggcgggaggaactgcgccagatc
gtcaccctgcaggtggaacgtctgcgccagcggctggctgagcgcaagctggagctcagc
ctgagcgatggggccgccgactggctcgccaatgccggatatgaccccgtctatggggca
cgaccgctgaaacgcgctgtgcaacgggaactggagacacccattgccaaagcgatcctg
gcgggtcgttacagcgaggggcaggcgatcagcgtggagctggaagcggacgtgttagcc
ctgcgctga
DBGET
integrated database retrieval system
