Synechococcus sp. WH 8109: Syncc8109_1847
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Entry
Syncc8109_1847 CDS
T03783
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
syh
Synechococcus sp. WH 8109
Pathway
syh02024
Quorum sensing
syh03060
Protein export
syh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Syncc8109_1847 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Syncc8109_1847 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Syncc8109_1847 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
syh02044
]
Syncc8109_1847 (ffh)
Enzymes [BR:
syh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Syncc8109_1847 (ffh)
Secretion system [BR:
syh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Syncc8109_1847 (ffh)
Eukaryotic Sec-SRP protein
Syncc8109_1847 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_16
APS_kinase
cobW
AAA_22
ArsA_ATPase
ParA
AAA_33
MeaB
nSTAND3
AAA_31
AAA_24
AAA_30
TsaE
6PF2K
SGT1
Motif
Other DBs
NCBI-ProteinID:
AHF64199
UniProt:
W0H063
LinkDB
All DBs
Position
complement(1352859..1354319)
Genome browser
AA seq
486 aa
AA seq
DB search
MFDELSARFDDAVKGLRGQDSISDTNVDGALKDVRRALLEADVSLPVVKEFVAEVRDKAV
GAEVVRGVSPDQKFIQVVHEQLVEVMGGDNAPLAKAAEAPTVVLMAGLQGAGKTTATAKL
GLHLKDQGRRALMVGADVYRPAAIEQLKTLGAQIDVEVFSLGAEAKPEDIAAAGLAKAKE
EGFDTLLVDTAGRLQIDTEMMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHDQVG
ITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEALQPFHPERMASRILGMGDVL
TLVEKAQKEVELADVEKMQKKLQEATFDFSDFVKQMRLIKRMGSLGGLMKMIPGMNKIDD
GMLKQGEQQLKRIEAMIGSMTQQERENPDLLASQPSRRRRIASGSGHQAADVDKVLADFQ
KMRGFMQQMSQGNMPGMGGMPGMGGMPGMGGMPGMGGIPGGGGRPGRGGPPKRQRPAKKK
KGFGDL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgagctttcagcccgttttgatgatgcggtcaaggggctgcgtggccaagac
agcatcagcgataccaacgtagatggagccctgaaggacgtccgtcgggccttgctggaa
gccgacgtcagcctgccggtggtgaaggagttcgtggctgaagtacgcgacaaagccgtt
ggtgccgaggtggtgcgcggggtcagcccggatcagaagttcatccaggtggtccatgaa
cagctcgtggaggtcatggggggcgataacgctcctctggccaaggcggctgaagctccc
accgtcgtgttgatggctggccttcagggtgctggtaaaaccaccgcgacggccaagctt
ggcctccacctcaaggatcagggtcgtcgagccctgatggtgggcgccgatgtttaccga
ccggccgccatcgagcagttgaaaacgcttggtgctcagatcgatgtcgaggtgttcagc
ctcggtgctgaggccaaaccggaagacattgcagccgctggtctggccaaggcgaaagag
gaaggcttcgacacactcctggtcgacaccgccggtcgcctccagatcgacaccgagatg
atggaggagatggtgcggatccgcaccgctgtgcagcccgatgaggtgctgctggtggtg
gattcgatgatcggtcaggaagcggccgaactcacccgcgccttccacgaccaggtgggc
atcaccggagcggtgctcaccaagcttgatggtgattctcgcggtggcgccgccctttcg
atccgcaaggtgagcggtcagccgatcaagttcatcggcaccggagagaaggtggaggcc
ctgcagccgttccatcccgaacggatggccagccgcatcctcggcatgggtgatgtgctg
acgctggtggagaaggcccagaaggaggtcgaactcgccgacgtcgagaagatgcagaag
aagctgcaggaggcgacgtttgatttctcggacttcgtgaagcagatgcgcttgatcaag
cgcatgggctcgctggggggtttgatgaaaatgatcccgggcatgaacaagatcgatgac
ggcatgctcaagcagggggagcaacagctcaagcgcatcgaggccatgatcggctcgatg
acccagcaggagcgggaaaatcccgacctcctggcgagtcaaccctcaaggcgtcgccgg
attgccagtggcagcggccatcaggccgcagatgtggacaaggtgctggccgacttccag
aaaatgcgcggcttcatgcagcagatgagccaaggcaacatgcccggaatgggaggcatg
cccggaatgggaggcatgcccggaatgggaggcatgcccggaatgggaggcatccccgga
ggtggaggacgtcccggtcgcggtggaccaccgaagcggcagcgacccgccaagaagaag
aagggcttcggggatctgtga
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