Synechococcus sp. WH 8109: Syncc8109_1978
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Entry
Syncc8109_1978 CDS
T03783
Symbol
rps1b
Name
(GenBank) RNA binding S1
KO
K02945
small subunit ribosomal protein S1
Organism
syh
Synechococcus sp. WH 8109
Pathway
syh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Syncc8109_1978 (rps1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
syh03011
]
Syncc8109_1978 (rps1b)
Ribosome [BR:
syh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Syncc8109_1978 (rps1b)
Bacteria
Syncc8109_1978 (rps1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
DUF2110
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AHF64322
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Position
1457705..1458979
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AA seq
424 aa
AA seq
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MSDRQAQWSMPAAGSPQPNRPKAPKPAATKPLQVMQINRREEQEKLAREAAEARAAAEAA
AEKARILEERAGLATPPRPVQQDPTSSPRTDDDALFDMGGMEGMTMADLMGAPDQQPKKE
QRNQPRSVDDFDFDEEAFLAALDENAPVGTTGEVIKGTVIGIESDGVYVDIGGKAPGYMP
KSEAGLGVVTNFRERFPKGLEVEVLVTREQNADGMVTISCRALELRKSWDRVKELDKQGK
VVQVIVNGFNRGGVTCDLEGLRGFIPRSQLQNGENHQEFVGKTLGVAFIEVNSETRKLVL
SEKRAAVAERFQDLEVGQLVEGQVAAVKPYGLFIDLGGISGLLHQSAITNGSLRSIREVF
DQGDRVSALITELDPGRGRIGLNTALLEGPPGELLIEKDKVMAEAADRASRAQNTLKQQE
QSAG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcgacaagcccaatggtccatgcccgcagccggcagtccgcagcccaaccgc
cccaaggcacccaagccggcagcgacgaaaccgctgcaggtaatgcagatcaaccgccgt
gaagagcaggaaaagctggctcgtgaggcggctgaagcacgggcagcagcagaggctgcg
gcggaaaaggcacgcatccttgaggaacgggcgggtctcgccacccctccgcgaccggtc
cagcaggaccccacctcttctccaagaacggatgacgacgctctgttcgacatgggcggc
atggaaggcatgaccatggccgacctgatgggcgcgcctgatcaacaacccaaaaaggag
cagcgcaatcagccgcgcagtgtggatgacttcgatttcgatgaagaagccttcctcgcc
gccctggacgagaacgctccggttggcaccactggtgaggtgattaagggcacggtgatc
ggcatcgaaagcgatggcgtgtacgtggatatcggcggcaaagcccccggctacatgccc
aagagcgaggcaggcctgggcgttgtgaccaacttccgggagcgctttcccaagggcctg
gaggttgaagttctggtgacccgtgagcagaacgctgatgggatggtcacaatcagctgt
cgcgctcttgagctgcgcaagagctgggaccgggtgaaggaactggataaacagggaaaa
gtggttcaagtcatcgtcaatggcttcaaccgcggcggtgtcacctgcgatctcgaaggg
ctgcgcggcttcattccccgctctcaactccaaaacggtgaaaaccaccaggaattcgtg
ggcaagaccctgggcgttgccttcatcgaggtgaattcggagacgcgcaagctggtgctt
tccgaaaaacgagccgccgtcgccgaacgcttccaggatctggaagtgggccaattggtg
gaaggccaggttgctgcggtgaagccctacggcctgttcatcgaccttggtggcatcagc
ggactgctgcaccaatcagccatcaccaatggcagcctgcgctcgatccgtgaggtgttc
gaccagggcgaccgcgtttcggccctgatcacggaactggacccgggccgcggacggatc
ggcctcaacacagccctgctagaggggcctcctggagagctgctgatcgaaaaagacaaa
gtgatggctgaggccgccgatcgcgccagccgcgcccagaacaccttgaaacagcaggag
caatcggccggatga
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