Synechococcus sp. WH 8109: Syncc8109_2021
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Entry
Syncc8109_2021 CDS
T03783
Symbol
crtE
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
syh
Synechococcus sp. WH 8109
Pathway
syh00900
Terpenoid backbone biosynthesis
syh01100
Metabolic pathways
syh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Syncc8109_2021 (crtE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
syh01006
]
Syncc8109_2021 (crtE)
Enzymes [BR:
syh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Syncc8109_2021 (crtE)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Syncc8109_2021 (crtE)
2.5.1.29 geranylgeranyl diphosphate synthase
Syncc8109_2021 (crtE)
Prenyltransferases [BR:
syh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Syncc8109_2021 (crtE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-ProteinID:
AHF64364
UniProt:
W0H0M4
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All DBs
Position
complement(1494153..1495043)
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AA seq
296 aa
AA seq
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MSAEFDFKAYLGKAKERVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACEL
AGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALL
TRAFEMVALRSPDVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHL
HKTGALLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDILDITASSDVLGKTAG
KDLIADKTTYPKLLGLDESRRRADALVNAAKEALQPWAEKAIPLLALADFITSRDR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgagttcgatttcaaggcctatctcggcaaggccaaagagcgggtggaagcg
gccctcgatggatcgctcggtccggagcggccggagtccctcagagaagcgatgcgctac
tccctgcttgccggtggcaagcgcttgcgcccgattctctgccttgccgcctgcgagctg
gcgggtggggaagcgacgcaggccctgcccacggcggtggcgttggaaatgatccacacc
atgtcgttaatccatgacgatctgccggccatggatgacgacgacctgcgccgtggtcgt
cccaccaatcacaaggtgtacggcgaagccgtggccatccttgccggtgatgccctgctg
acccgcgccttcgaaatggtggcgctgcgcagtccggatgtgccggctgagcgtctgctc
aaggtggtgggagaactgtcgttggtggccggcgcccctggcctggtgggcggccaggtg
gtggatctggaaagcgaaggcaaggaggtggatcttgaaaccctcgagtacatccacctc
cacaaaaccggagcgctgttgagtgcctgtgtgattaccggggcgataatcggcggcgcc
gatgaggcgctgatcaaggccctgcgcacctatgccagggggatcggcctcgccttccag
atcatcgacgacatcctcgacatcaccgccagcagcgacgtgctcggcaaaaccgccggc
aaggacctcattgccgacaagaccacctatcccaagcttcttgggctcgacgagtcccgc
cgccgggccgatgcgttggtcaatgcagcgaaagaggcgcttcaaccctgggccgagaag
gcgattcccctgctggccttggccgacttcatcaccagccgcgaccgatga
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