Synechococcus sp. WH 8109: Syncc8109_2103
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Entry
Syncc8109_2103 CDS
T03783
Symbol
fadD
Name
(GenBank) putative long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
syh
Synechococcus sp. WH 8109
Pathway
syh00061
Fatty acid biosynthesis
syh00071
Fatty acid degradation
syh01100
Metabolic pathways
syh01212
Fatty acid metabolism
syh02024
Quorum sensing
syh04146
Peroxisome
Module
syh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Syncc8109_2103 (fadD)
00071 Fatty acid degradation
Syncc8109_2103 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Syncc8109_2103 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Syncc8109_2103 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
syh01004
]
Syncc8109_2103 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syh04147
]
Syncc8109_2103 (fadD)
Enzymes [BR:
syh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Syncc8109_2103 (fadD)
Lipid biosynthesis proteins [BR:
syh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Syncc8109_2103 (fadD)
Exosome [BR:
syh04147
]
Exosomal proteins
Exosomal proteins of breast milk
Syncc8109_2103 (fadD)
Exosomal proteins of breast cancer cells
Syncc8109_2103 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AHF64441
UniProt:
W0H0R3
LinkDB
All DBs
Position
complement(1567478..1569391)
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AA seq
637 aa
AA seq
DB search
MTASWSPTTRETDALQCHSHVQRLPRVDAVWPWLADRHGLIAAVDAPHAAHPERFNFGEL
AERIATAAAAFRRHGVKDGDVVALFAENSPRWLVADQGLMRAGAADAVRGASAPVEELRY
ILSDCQATALVVQNADLWRRLALPPDQRAQLRFVLQLEGEPAEGAIGWEAFLASGAGLDP
VCPAGGRDAVATVLYTSGTTGQPKGVPLTHANLLHQMSSLACVAYPEPGAPVLSVLPIWH
AYERSASYFFLSCGCTQTYTTIKQLKKDLPRVRPIAMATVPRLWEAVQAGFEDVLKTFPP
SRQRLLRAALANSAAQRKALRTARNLLLEPVSASDRLRACGSAALRWPLHALASTLIWPK
LRRQLSGGQLAYPISGGGAIAPHIDAFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGS
SGLPMPQTEFRIVDPDNGQPLGFRQRGRVMVRGPQVMAGYLGKPEASAKVLDAAGWFDTG
DLGMLMPDGSVALTGRAKDTIVLSSGENIEPGPLEEALVASPLIEQVMLVGQDERQLGGL
IVPRAEVIVAWAAEAGVSAAQDLGGQPGDPALLRLLMRECNRLLKQRSGSRGDERLAGVV
LVDPFSIENGLLTQTLKQRRDRIASRDQHLIDGLYGR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgacggccagctggagcccgacaacccgtgaaacagacgctttgcagtgtcattcccat
gttcagaggttgccgagggtcgatgcggtgtggccctggctcgccgaccgccatgggctg
attgccgccgtcgatgcgccccatgcggcgcatcccgaacgcttcaatttcggcgaactg
gcggagcgcatcgccaccgctgccgccgcctttcggcgccatggcgtgaaagatggcgat
gtggtggctctgtttgctgagaacagcccccgctggctggtggcggatcagggcttgatg
cgtgccggtgccgctgatgccgtgcgcggtgcctcggccccagtcgaggagctgcgctac
atcctttcggattgccaggcgacggctctggtggttcagaacgctgatctttggcgtcgt
ctggcccttcccccggaccaacgggctcagctgcgcttcgtgcttcagctggaaggggag
cctgccgagggcgccattggctgggaggcgtttctggcgtcaggggccggccttgatccc
gtctgcccggcgggggggcgagacgccgtggccactgttctgtacacctcgggcacgacc
ggccaacccaaaggggtcccgttgacccacgccaacctgctgcatcagatgagctcactg
gcctgtgtggcctatcccgagcccggtgctccggtgctgagtgtgttgcccatctggcat
gcctacgagcgcagtgccagctacttcttcctctcctgcggctgtacgcagacctataca
accatcaagcaattgaagaaggatctgccgcgggtccggccgatcgcgatggccaccgtg
ccgaggctctgggaggcggttcaggctggatttgaggatgtgctcaagactttccccccc
tcccggcagcgcctgctgcgggcggcattggccaacagcgctgcccagcgcaaagccctg
cgaacggcgcgcaacctcctgctggaaccggtatcagcctccgaccggctgcgtgcctgc
ggctccgctgccctgcgctggcccctgcatgctttggcctcgaccttgatctggccgaag
ctgcgtcgccagctcagtggcggtcagctcgcctatccgatcagtggtggcggtgccatc
gcgccccacatcgatgccttttttgaagccgtggggattgagctgctggtgggctatggc
ctcaccgaaaccagccctgtggtgagttgccgcaggccctggcgcaacatccgcggcagc
tccgggctgccgatgccccagaccgaattccggatcgtcgatcccgacaacggccagccc
ctgggcttccggcaacgggggcgggtgatggtgcggggcccccaggtgatggcgggctac
ctcggcaaacccgaggccagcgccaaggttctcgatgctgcgggatggtttgacaccggc
gatctcggcatgctcatgccggatggttcggtggccctcaccggccgagccaaagacacg
attgtgttgagcagtggcgagaacatcgagcccggccccctggaagaggccctagtggcc
agccctctgatcgagcaggtgatgctggtgggtcaggatgaacgtcagctaggtggtctg
atcgttccccgtgctgaggtgatcgtggcctgggcggctgaagccggcgtgagcgcggcg
caggatctgggcggccaacccggtgatccggctctgctccgtttgttgatgcgcgaatgc
aaccgcttgctcaagcagcggtcgggctcccggggtgatgaacggctggccggggtggtg
cttgtggatcccttcagtattgagaatggactactgacccagaccctgaagcagcgccgt
gatcgcatcgccagccgcgatcagcatttgatcgatggcctttacggacgttga
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