Synechococcus sp. WH 8109: Syncc8109_2128
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Entry
Syncc8109_2128 CDS
T03783
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
syh
Synechococcus sp. WH 8109
Pathway
syh00521
Streptomycin biosynthesis
syh00523
Polyketide sugar unit biosynthesis
syh00525
Acarbose and validamycin biosynthesis
syh00541
Biosynthesis of various nucleotide sugars
syh01100
Metabolic pathways
syh01110
Biosynthesis of secondary metabolites
syh01250
Biosynthesis of nucleotide sugars
Module
syh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Syncc8109_2128 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Syncc8109_2128 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
Syncc8109_2128 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Syncc8109_2128 (rfbB)
00525 Acarbose and validamycin biosynthesis
Syncc8109_2128 (rfbB)
Enzymes [BR:
syh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Syncc8109_2128 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
NAD_binding_10
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AHF64465
UniProt:
W0GW60
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All DBs
Position
1587014..1588138
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AA seq
374 aa
AA seq
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MVSSMPSASDLLGNRCRVLVTGGAGFIGGAVIRRLLQETTVTVFNLDKMGYASDLSSIEE
VLNQLGGAANDRHRLQKVDLTNAAAVEAAVQEADPDLVMHLAAESHVDRSICGPGVFIES
NVNGTYNLLQAVRSHYEGLSGERRDAFRMHHISTDEVFGSLGPEGRFSETTPYDPRSPYS
ASKAASDHLVQAWHHTFGLPVVLTNCSNNYGPWQFPEKLIPVVTLKAAGGESIPLYGDGL
NVRDWLYVEDHVDALLLAACKGASGRSYCVGGHGERTNKEVVHAICQQLDLSRPASAPHA
DLITPVTDRPGHDRRYAIDPGRISSELGWRPRHNVEEGLAETVHWYLSHQEWCSKVRERA
GYDGSRLGIETVKQ
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgtccatgccttccgcctccgacctgttgggaaatcgctgcagagttctggtc
accggaggtgccggcttcattggaggcgccgtcatacgcaggctgttgcaggagaccaca
gtcaccgtcttcaacctcgacaagatgggctatgccagcgacctttcctcgattgaggag
gtgctgaaccagctggggggcgcggcgaacgatcggcacaggctgcagaaggtggatctg
accaatgcagcagccgttgaggctgcggtgcaggaggccgaccccgatctggtgatgcac
ctggcagcggaaagccacgtggatcgatccatctgcggccccggcgtgttcatcgagagc
aatgtcaacggcacctacaacctcctgcaggcggtgcggagccactacgagggcttgagc
ggtgaacgccgggatgccttccggatgcaccacatcagcaccgacgaagtctttgggtcc
ctgggccccgagggacgcttctcagagacaacgccctacgacccccgcagcccctactcc
gccagcaaggcggccagtgatcacctcgttcaggcctggcaccacacctttgggcttcct
gtggtgctcaccaactgttcaaacaattacggcccctggcagttcccggaaaaacttatc
cccgtggtcaccttgaaggccgctggaggtgagtcgattcctctctacggcgatgggctg
aatgtgcgggattggttgtacgtggaagaccatgtcgatgcattgcttctggcggcctgc
aaaggagcctcgggccgcagttactgcgttggcggccatggtgagcgcaccaacaaggag
gttgttcacgccatctgccaacagttggatttaagtcgtcctgcatcggctccccacgcc
gacttgatcacgccggtgacagaccgtcctggccacgaccgccgctacgcgattgaccca
ggccgcatcagttccgagctgggctggaggcctcgccacaatgtggaagagggtctagcg
gagaccgtgcactggtacctgtctcatcaggaatggtgcagcaaggtgcgcgagcgggcg
ggatatgacggcagcagattgggcattgaaacggtgaagcaataa
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