Synechococcus sp. WH 8109: Syncc8109_2166
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Entry
Syncc8109_2166 CDS
T03783
Symbol
nusA
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syh03021
]
Syncc8109_2166 (nusA)
03009 Ribosome biogenesis [BR:
syh03009
]
Syncc8109_2166 (nusA)
Transcription machinery [BR:
syh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Syncc8109_2166 (nusA)
Ribosome biogenesis [BR:
syh03009
]
Prokaryotic type
rRNA transcription factors
Syncc8109_2166 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_1
KH_NusA_C
Phyto_Pns9_10
Motif
Other DBs
NCBI-ProteinID:
AHF64499
UniProt:
W0H114
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All DBs
Position
1622092..1623543
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AA seq
483 aa
AA seq
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MALVLLPGLSNLIDDISEEKKLPPQVVEAALREALLKGYERYRRTLYIGISEDPFDEEYF
SNFDVGLDLEEEGYRVLASKIIVDEVESEDHQIAIAEVMQVADDAQVGDTVVLDVTPEKE
DFGRMAAATTKQVLAQKLRDQQRRMIQEEFADLEDPVLTARVIRFERQSVIMAVSSGLGR
PEVEAELPRRDQLPNDNYRANATFKVFLKEVSEVPRRGPQLFVSRSNAGLVVYLFENEVP
EIQEGSVRIVAVAREANPPSRSVGPRTKVAVDSIEREVDPVGACIGARGSRIQQVVNELR
GEKIDVIRWSQDPGQYIANSLSPARVEMVRLVDPVGQHAHVLVPPDQLSLAIGREGQNVR
LAARLTGWKIDIKNSTEYDQEAEDAVVAELISQREEEEALQQQAEERLAAEQAARAEEDA
RLRELYPLPEDEEEYGEEQAEQEFSEQEPDEVEAGSETEFEAEAETTDAAVEADADPDQE
QVR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgtcctgcttcccggtctcagcaacctgatcgacgacatcagcgaagagaag
aagctgccgccccaggtggtggaagcggccctgcgggaggccctgttgaagggctatgag
cgctaccggcgcacgctgtacatcggcatcagcgaagacccctttgatgaggagtacttc
agcaactttgacgttggcctcgatcttgaggaggagggctaccgggttctcgccagcaag
atcattgttgatgaggtggagagcgaagaccaccagatcgcgatcgccgaggtgatgcag
gtggccgatgacgcccaggtgggcgacacggtggtgctggatgtcaccccagagaaagaa
gatttcggccggatggctgccgccaccaccaaacaggtgcttgcccagaagctgcgggat
cagcagcgccgcatgatccaggaggaattcgctgatctggaggatccggtgctgacggcc
cgggtgatccgcttcgagcgccagtcggtaatcatggcggtcagctcaggcctgggccgt
ccggaagtggaggctgaactcccccggcgcgatcaactgcccaacgacaactaccgcgcc
aacgccaccttcaaggtcttcctgaaagaggtgagcgaagtgccccgccggggaccgcag
ctgttcgtcagccgctccaatgccggtttggtggtctacctgttcgagaacgaagttccc
gaaattcaggaaggttccgttcggatcgtggccgtagcccgtgaggccaatcccccctcc
cgttccgtgggcccccgcaccaaggtggccgtcgacagcatcgaacgagaggtggatccc
gtcggcgcctgcatcggcgcccgcggctcccgcattcagcaggtggtgaacgaactgcgt
ggagaaaaaatcgacgtgatccgctggtcgcaggatccgggccagtacatcgccaattcc
cttagccccgctcgggtggaaatggtgcgcctggtggatcccgtgggccagcacgcccat
gtgctggtgccccccgatcagctgagcctggccatcggccgcgagggccagaacgtgcgc
ttggccgcccgacttaccggctggaaaatcgacatcaagaactccaccgaatacgaccaa
gaggcagaggatgccgtggtggcggagctgatctcccagcgtgaggaggaggaagccctc
cagcagcaagccgaagaacgactagccgccgaacaggccgctcgggcagaagaggatgca
cgcctgcgagagctgtatccgctgcccgaagacgaggaggagtacggcgaggagcaggcc
gagcaggagttctctgagcaggagcccgatgaggtggaagccggcagcgaaaccgagttc
gaggccgaagcagaaaccacggacgcagcggttgaggccgatgccgatcccgatcaggag
caggtccggtga
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