Synechococcus sp. WH 8109: Syncc8109_2213
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Entry
Syncc8109_2213 CDS
T03783
Symbol
kaiC
Name
(GenBank) putative circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
Syncc8109_2213 (kaiC)
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GFIT
Motif
Pfam:
ATPase
AAA_25
AAA_16
DnaB_C
AAA_22
GvpD_P-loop
AAA_14
TrwB_AAD_bind
SLFN-g3_helicase
PAXNEB
RecA
AAA_7
ResIII
Sigma54_activat
AAA_24
T2SSE
NPHP3_N
AAA_19
NACHT
AAA_18
Roc
Rad51
AAA_30
cobW
SRP54
MEDS
Motif
Other DBs
NCBI-ProteinID:
AHF64542
UniProt:
W0GW71
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Position
complement(1660521..1662059)
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AA seq
512 aa
AA seq
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MQFPPTSGQPQMQVQKLPTGIEGFDDVCQGGLPIGRSTLISGTSGTGKTVFSLHFLHNGI
KQFDEPGIFVTFEESPLDILRNAASFGWNLQEMVEQDKLFILDASPDPDGQDVAGSFDLS
GLIERINYAIRKYKAKRVAIDSITAVFQQYDAVFVVRREIFRLIARLKEIGVTTVMTTER
IDEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTTHMKGEFPFTMGTHGI
SIFPLGAMRLTQRSSNVRVSSGVPRLDDMCGGGFFKDSIILATGATGTGKTMLVSKFLED
ACRNKERAILFAYEESRAQLLRNGTSWGIDFEQMEQDGLLKIICAYPESTGLEDHLQIIK
TEICQFKPSRMAIDSLSALARGVSHNAFRQFVIGVTGYAKQEEIAGFFTNTSEEFMGSHS
ITDSHISTITDTILLLQYVEIRGEMARALNVFKMRGSWHDKGIREFVITGNGPQIKDSFS
NFERIISGVPHRVTTDERSELSRIARGVSTED
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcagttccccccgaccagcggtcagcctcagatgcaggttcaaaagctcccgacaggg
atcgagggctttgatgatgtatgccagggcggcctgccgatcggccgcagcacgctgatc
agcggcacgtccggcaccggcaagacggtgttttcgctgcacttcctccacaacggcatc
aagcagttcgacgaacccggcatcttcgtcacctttgaggaatcgcccctcgacatcctg
cgcaacgccgccagtttcggctggaacctgcaggagatggtcgagcaggacaaacttttc
atccttgacgcctcaccggatccggacggccaggacgtggccggcagttttgatctctct
ggtttgatcgagcggatcaactacgccatccgcaaatacaaggctaagcgggttgctatc
gactcgatcacggcggtgttccagcagtacgacgctgtgtttgtggtgcgtcgtgagatc
tttcggctgatcgcgaggctcaaggaaatcggcgtcaccacggtgatgaccaccgaacgg
atcgacgagtacggcccgatcgcccgctacggcgttgaggaatttgtgtccgacaacgtg
gtgattctgcgcaacgtgctcgagggagagcggcgtcggcgcacccttgagattctcaag
ctgcggggcaccacccatatgaagggcgagttcccgttcacgatgggaacccacggcatc
agcatcttcccccttggggccatgcgcctaacccagcggtcctccaacgtccgggtcagt
tccggcgtgccgcgcctggatgacatgtgcggcggtggtttcttcaaggactcgatcatc
ctggccaccggagccactggaacgggcaagacgatgctcgtctccaaattcctcgaagac
gcctgccgcaacaaggaacgtgcgatcctttttgcctatgaggaatcgcgggctcagctg
ctgcgcaacggcaccagctggggcatcgacttcgagcagatggagcaggacgggctgctc
aagatcatttgcgcctatcccgaatccacgggccttgaggatcacctgcagatcatcaag
acggagatctgccagttcaaaccgtcgcggatggcgatcgactccctttcggccttggcg
cgcggtgtgagccacaacgccttccgtcagttcgtgatcggggtgaccggttacgccaag
caggaggagatcgccggcttcttcacgaacacctccgaggagttcatgggcagccattcg
atcaccgactcccacatctccacaatcactgacacgatcctgctgctgcagtacgtggag
atccgcggggagatggcccgcgccctcaacgttttcaagatgcgcggttcatggcacgac
aagggcatccgcgaatttgtgatcacgggcaatggtcctcagatcaaggattccttctcc
aacttcgagcggatcatttccggtgtgccccatcgggtcaccaccgatgagcgcagcgag
ttgtcgcgcattgcccgcggcgtctccaccgaggactga
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