KEGG   Synechococcus sp. WH 8109: Syncc8109_2220
Entry
Syncc8109_2220    CDS       T03783                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
syh  Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:syh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:syh03016]
    Syncc8109_2220 (truB)
Enzymes [BR:syh01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Syncc8109_2220 (truB)
Transfer RNA biogenesis [BR:syh03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Syncc8109_2220 (truB)
 Prokaryotic type
    Syncc8109_2220 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 TruB_C
Other DBs
NCBI-ProteinID: AHF64547
LinkDB
Position
1665058..1665966
AA seq 302 aa
MQQSGHPAPAPVNGPFGFVVIDKPAGLTSHACVSRLRRSYGLKRVGHGGTLDPAVTGVLP
IALGPATRLLPYLPGEKTYTGVIQLGRRTSSDDLEGELLEQQAWPGLSQAELNSGLEAFR
GAIEQRPPQISAVHVDGERAHARARRGEAMDLPPRAVTVHRLELLDWDVALGQLSIEVHC
SAGTYIRSIARDLGDRIGCGGCLASLRRTQALGFHAHQAHPLPERDAVPPDPLSPLLALG
ALPRRVLSEAEQIDWRCGRRIAMDPGAGEAVVVCNADGSMAGIGHRERESLLRPKVVFDA
AG
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcaacagtcggggcaccctgctccagccccggtgaacggccccttcggcttcgtggtg
atcgataagcccgcaggcctcacctcccacgcctgcgtcagccgcctgcgccgcagctac
ggtctcaagcgcgtgggccatggaggcacccttgatcctgctgtcaccggggttctcccc
attgccctagggccggcgacccgattgctgccctacctccccggggaaaagacctacacc
ggggtgattcagctgggacggcgcaccagcagcgacgatctggaaggagagctgctggag
cagcaggcctggcctggcctcagtcaggccgaactcaacagcggcctggaggcgttccgg
ggcgcgattgaacagcgtccaccgcagatctccgccgtccatgtagatggcgaacgggcc
cacgccagggcacggcgcggtgaagccatggatctgccgccgcgggccgtcaccgtgcac
cggctggagctgttggattgggatgtggccctggggcagctgagcatcgaggtgcactgc
tcggctggcacctacatccgctcaatcgccagggatctgggggaccgcatcggctgcgga
ggctgtctggcctctctgcgccgcacccaggccctggggttccatgcgcatcaggcccat
cccctgccggagcgagacgctgtgccgcccgatcccctgtcgccgctgctggccctaggg
gccctgccccggcgtgttcttagcgaagccgagcagatcgactggcgctgcggccgacgc
attgcaatggatccaggggctggagaggcggtggtggtgtgcaacgcggatggaagcatg
gccggcatcggccaccgcgagagagaaagtctgttgcgaccaaaggtggtcttcgatgca
gcaggctga

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