Synechococcus sp. WH 8109: Syncc8109_2341
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Entry
Syncc8109_2341 CDS
T03783
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
syh03036
]
Syncc8109_2341
Chromosome and associated proteins [BR:
syh03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Syncc8109_2341
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
Spectrin
Exonuc_VII_L
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AHF64662
LinkDB
All DBs
Position
1748009..1751563
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AA seq
1184 aa
AA seq
DB search
MTIPLEEGFTVVTGPNGSGKSNILDGVLFCLGLATSRGMRAERLPDLVNSGMLKAGKAAE
TTVSVRFDLSDWTPDAAEEGLEAPAEGPWIQPGQTEWTVTRKLRVMPGGSYSSSYSADGV
PCNLQQLQTQLRRLRIDPEGSNVVMQGDVTRIVSMSNRDRRGLIDELAGVALFDTRIEQT
RRKLDDVQERQERCRIIEQELLASRQRLEKDCAKARQYQDLRERLQLGRRQEMVLAYEAA
QQALKDLATRQQALEAQEQKDAAAIASGREQLNKAVAELNLLQEQVKALGEDQLLAVQAE
LAGLDTSSRELERQASLHQEEGQKLQAQRQNLATRRQQWQLQSRELERDPHQDALSAAND
NCKAAEAAVEISRRRLADVVGRSGAWVEEQKRRSGRRQELQSSVTPLLEEHQLLQERLRQ
ERERLEELTQEQHQDGTDGDAVEQQLATLEATWQNLLQAIADGKQELQQTAESLAIQQRT
RSRLEQEQTRLEREIARLESRRDALQESRGTGALRLLLEAGLDGIHGPVAQLGEVEDHHR
LAVEVAAGARLGQVVVDDDRIAARAIELLKSRRAGRLTFLPLNKIRAPGGGGSSAAFARG
ARPGGDSGAGLIGRAVELVRFEPIYDQVFAYVFGDTLVFSDLASARQQLGRSRAVTLDGE
LLEKSGAMTGGSFSQRSSSLSFGRSSDQDEAEPLRRRLLELGESLVACRREESKLAQVIE
QQKPQLRELEKQQAALIAERNAARRNHGPLLERSRQRAERLSKLQQDQTEQQQRLEAIST
ALTPLTAELQALDEAERNSGNNDDASAWAQLQTEQEAADQRLEAARRERDQLLNARRERQ
LAIERLGDQENALAAEETRLQEAVKALASAHGAWRQQQSDLQEKRKELEQQQTDLQERFG
SQRRARDAAEAEVGRQRQALQQAEWNLERLKEDREGLIEEQRSGAVRLQEMEQALPDPRP
EIPEALQLAGLEALQTDLQAIQQRMEALEPVNMLALEELEALEERLNELNERLDVLNNER
EELLLRIETVATLRQDAFMEAFTAVDGHFREIFASLSDGDGHLQLENPEEPLEGGLTLVA
HPKGKTVRRLASMSGGEKSLTALSFLFALQRFRPSPFYALDEVDSFLDGVNVERLAALIA
RQAEAAQFMVVSHRRPMIGAAQRTIGVTQARGAHTQVVGLPDAA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccctcttgaagagggattcactgtcgtgaccggacccaatggctccggcaag
agcaacatccttgatggagttctgttttgcctgggcctggccaccagtcgtggcatgcgg
gctgaacgcctgccggacctggtcaacagcggcatgctcaaggccggcaaggccgctgaa
acaaccgtcagcgtccgctttgatctaagcgactggacacccgatgccgccgaggaaggc
ttggaagcaccggcggaggggccctggattcagcctggacaaacggaatggacggtgacc
cgcaagctgcgggtgatgccggggggctcctacagctccagctacagcgccgacggggtt
ccctgcaacctgcagcagctgcagacccagctgcgccgccttcgaattgatcccgagggc
agcaacgtggtgatgcagggagacgtcacccgtatcgtctcgatgagcaatcgcgaccgc
cgcggcctgatcgatgaactggccggtgttgcccttttcgacacccggattgaacagacc
cgccgcaagctcgatgacgtgcaggagcgtcaggagcgctgccggatcatcgagcaggaa
ttgctggccagtcgccaaaggctggagaaggactgcgccaaggcccggcaataccaggac
ttgcgggaacggctgcaactgggacgccgccaggaaatggtgctggcctacgaggccgcc
cagcaggccctcaaggatctagccacacgccaacaggcgctggaagcccaggaacagaaa
gacgccgcggccatcgccagcggccgggagcagctgaacaaagctgttgccgaactgaac
ctgctccaggagcaggtgaaggccctgggggaagaccagctgctggcggttcaggcggaa
ctggctggcctcgacaccagcagccgcgaactggagcgccaggccagcctccaccaggag
gagggccagaaactgcaggcgcagcgccagaacctcgccacccgtcgccagcagtggcag
ctgcaatcacgggagctggaacgcgatccccatcaggacgccctcagcgcggcaaacgac
aactgcaaggccgctgaagcggccgtggaaatatcccgccgccggctggcggatgttgtg
ggccgctccggcgcctgggtagaggaacaaaagcgccgcagtggtcgccgtcaggagttg
caaagcagcgtcactcccttattggaggagcaccaactgctgcaggaacggcttcgccag
gaacgggaacggctggaagagctcacccaggagcagcaccaggacggcacagacggcgac
gccgtggagcaacagctcgcaaccctggaggcaacctggcaaaacctgctgcaagccatt
gccgacggcaaacaggagctccagcagaccgccgaatcgctggccatccaacagcgcacc
cgcagccggctggagcaggagcagacccgcttggaacgggagatcgctcgcctggagagc
cggcgggatgcccttcaggaaagccgtggcactggagcactgcgcctgctgttggaggcc
ggcctcgatggcatccacggccctgtcgcccagctgggagaggtggaggatcaccatcgc
ctcgccgtggaagtggccgcgggggcccgtctcggccaggtggtggtcgatgacgaccgc
atcgccgcccgcgccatcgaactactcaagagccgccgtgctggccggctcaccttcctg
cccctgaacaagatccgcgcgccagggggcgggggctcttcagccgcctttgcccggggt
gcacgccccggtggggacagcggtgccggactgatcggccgggccgtggaactggtgcgg
ttcgaaccgatctatgaccaggtgtttgcttacgtcttcggcgacaccctggtgttctcc
gacctggccagcgcccgtcaacaactgggccgttccagggcggtgaccctggatggggag
ctgctggaaaagagcggcgccatgaccggcggcagcttctcccagcgcagcagcagcctc
agcttcggtcgcagcagcgatcaggacgaagccgaacccctgcggcggcgcctgctggaa
ctgggggaatccctggtggcctgccggcgggaggagtcgaagctggcccaagtgatcgag
cagcagaaaccccagctgcgcgaactggaaaagcaacaggcggccttgatcgccgagcgc
aatgccgcccggcgaaaccacggcccgctgctcgagcgcagccgccagcgggccgaacgg
ctcagcaaattgcagcaggaccagaccgagcaacaacagcggctcgaagccatcagcact
gcactcacgccactcaccgcggaactgcaggccttggatgaggcggaacgcaacagcggc
aacaacgacgatgcctccgcctgggcccaacttcagacagaacaggaagccgccgaccaa
aggctggaggcggcccgccgcgagcgcgaccagctgctgaatgcccggcgcgagcggcag
ctggcgattgaacgcctgggggaccaggagaatgctctggccgccgaagaaacccgcttg
caggaggcggtgaaggccctcgccagtgcccatggggcctggcgccagcagcagagcgac
ctccaggagaagcgcaaagagctcgagcaacagcagaccgacctgcaggagcgcttcggc
agccagcgccgggcccgggacgccgcggaagccgaggtgggccgccagcgtcaggccctg
cagcaggccgaatggaatctggagcggctcaaggaagaccgcgaaggattgatcgaagaa
cagcgcagcggtgcggtacgcctgcaggagatggaacaggccctgccggacccgaggccg
gagatcccggaagcccttcagctggcgggattggaagccttgcagaccgatctgcaggcc
atccagcaacgcatggaagcgctggagcccgtgaacatgctggcgctggaggaactcgag
gccctcgaagagcggctcaacgaactcaacgaacgcctcgacgtgctcaacaacgagcgg
gaagaattgctgctgcggatcgaaaccgtggccaccctgcgccaggacgccttcatggaa
gccttcaccgccgtggatggccatttccgcgagatctttgcctcgctctccgatggtgat
ggccacctgcaactggagaacccagaggagcctttggaaggtggcctcaccctggtggcc
catcccaagggcaaaaccgtgcggcgcctggcctcgatgtcggggggagagaaatcactc
accgccttgagctttctgttcgccctccagcgcttccggccgtcgccgttctatgccctc
gacgaggtggacagcttcctcgacggtgtcaatgtggagcgcctggcggctctgatcgcc
cgtcaagccgaggcagcccagttcatggtggtcagccaccgccgcccgatgatcggcgca
gcccagcgcacgatcggagtgacccaggcccgcggcgcccatacccaggtggtgggttta
ccagatgccgcctga
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