Synechococcus sp. WH 8109: Syncc8109_2492
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Entry
Syncc8109_2492 CDS
T03783
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syh03400
]
Syncc8109_2492 (radA)
DNA repair and recombination proteins [BR:
syh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Syncc8109_2492 (radA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
DUF7125
AAA_22
ChlI
nSTAND_NTPase5
AAA_16
GvpD_P-loop
AAA
Rad51
DUF7129
AAA_5
Lon_C
AAA_14
Elong_Iki1
Zn_ribbon_NrdR
DUF8455
nSTAND3
TniB
PAXNEB
NACHT
ATPase_2
DZR
Zn_ribbon_Com
DAP3
AAA_24
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
AHF64799
LinkDB
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Position
complement(1871734..1873131)
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AA seq
465 aa
AA seq
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MPKSTAVFICQVCGARARQFFGRCPECGSWNSLVEQSQPADDGRRRRSAPDPEQAAAPRR
STAMASLEDQPLQRLATGSAEFDRVLGGGLVPGSLVLVGGDPGIGKSTLLLQSASAMAAG
ASVLYVSAEESAQQVKLRWQRLAGGASELQLLAETDLELVLEELEALRPAVAIIDSIQAL
HDANLTSAPGSVGQVRECAAALQRLAKRQNISLLLVGHVTKEGMLAGPKVLEHLVDAVLT
FEGDRFASHRLLRAVKNRFGATHELGLFEMQSGGLAEVGNPSELFLSDARASGVATIVAC
EGTRSLVVDLQALVNVTSYASPRRTATGIGTNRLHQILAVLEKHMGLPLSRFDCYLAVAG
GLEVEEPAADLGVAAAVVASFRDLTLPAGTVLIGELGLGGQLRPVGQLELRLQEAARLGF
QRAVVPRGSGLGDLASGLDLALLEADSVTEALVLALGDAVQPDQD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaagtccaccgctgttttcatctgtcaggtctgcggagcccgtgcccgacagttt
ttcggccgttgcccggagtgcggcagctggaattcgttggtggagcaatcccagcccgcc
gacgatggccgtcgccgccgcagtgctccggatccggagcaggccgctgccccgcgacgg
tccacggccatggcctcgttggaggatcagccgctgcagcggctggcaaccgggtcggcg
gaatttgatcgcgttctgggtggtggtctggttcccggttcgctggtgctggtgggaggt
gatccgggcatcggtaagagcacattgctgctgcagagcgcctcagcaatggcggccggt
gcatcagtgctctatgtcagtgctgaggaatcagcgcagcaggtgaagctgcgctggcag
cggcttgccgggggggcatcggagctgcagttgctggccgaaaccgatctggaactggtg
ctggaggagctggaggccctgcgccccgctgtggcgatcatcgacagcattcaggcgttg
catgacgccaacctcacaagtgcgccggggtccgtcggtcaggtgcgtgaatgtgcggcg
gccctgcaacggctggcgaaacgccagaacatctcattgttgttggtgggccacgtcacc
aaagaaggcatgttggccggcccgaaggtgttggaacacctcgtggatgcggtgctcacc
tttgagggagaccgcttcgccagtcatcgcctgctgcgggccgtcaagaaccgcttcggt
gcaacccatgagttgggtttgtttgagatgcaaagcggtggcctggccgaggtgggcaac
cccagcgagctgttcctcagcgatgcccgcgcctccggtgtcgctacgatcgtggcctgt
gagggcacccgctcgttggtggtggatctgcaggccttggtgaatgtcaccagctatgcc
agtccgcgacgtacggcgacagggatcggcaccaaccgtttgcaccagatcctcgcggtg
ctggagaagcacatgggactgccgctctcccgcttcgactgctacctggccgttgccggt
ggcttggaggtggaggaacctgcggcggatcttggggtggctgcagcggtggtggccagc
ttcagagatctcaccctgcctgcgggcacggtcttgatcggcgagcttggtttggggggg
cagttgcgccctgtgggtcagctggagcttcggctccaggaagctgcccggctggggttc
cagcgggccgtcgtcccccggggcagtggcttgggcgatctggcctctggtttggatctt
gctcttctggaggccgacagcgtcaccgaggccctggtgttggcgctcggtgatgccgtg
cagcccgaccaggactga
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