Synechococcus sp. WH 8109: Syncc8109_2562
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Entry
Syncc8109_2562 CDS
T03783
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
syh
Synechococcus sp. WH 8109
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syh03016
]
Syncc8109_2562 (trmE)
Transfer RNA biogenesis [BR:
syh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Syncc8109_2562 (trmE)
Prokaryotic type
Methyltransferases
Syncc8109_2562 (trmE)
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
GTP_EFTU
AIG1
RsgA_GTPase
Roc
ABC_tran
AAA_18
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AHF64869
UniProt:
W0H227
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All DBs
Position
complement(1930684..1932036)
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AA seq
450 aa
AA seq
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MPSTDTIAAVATAVAPGQGGIAVIRLSGPAAEATGRSVVHCPGRQEWGSHRVVYGHVMDG
EGRRLDEVLLLLMRGPRSFTGEDVVEIHCHGGVIAVQRVLEQVLRQPGVRRALPGEFSQR
AVLNGRLDLTRAEAVSELVAARSRRAAELAIAGLDGGIQAQITALRERLLDQLTELEARV
DFEEDLPPLDGEALQQQLQAVRLELQQLVRDGERGDALRKGLRVALVGRPNVGKSSLLNR
LSRRERAIVTDLPGTTRDLLESEIALEGVPITLLDTAGIRSTDDAVERLGIARSEEALAT
ADVVLLVLDGHAGWTSEDAALLARIPEQIPRILVANKADLPAGTFPQPVDVQLSALEGTG
EADLVQVLLERCGAAGTEGVLLALNQRQRDLAAQAAEALACSQEVAAQQLPWDFWTIDLR
EAIRALGEITGEEITEAVLDRVFSRFCIGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagcaccgacacgattgctgccgtggccaccgccgtggccccaggtcagggcggc
atcgccgtgattcgtctctccgggccggctgcggaagcgacggggcgcagcgtggtgcac
tgcccgggccgacaggagtggggatcgcaccgggtggtgtacggccatgtgatggatggc
gagggccgccgtctcgatgaggtgctgctgctgctgatgcgcgggccccgcagcttcacc
ggtgaggacgtggtggagatccactgccatggcggggtgatcgccgtgcagcgggtgctc
gaacaggtgctgcggcagccgggagtgcgccgggccctaccgggcgagttcagccagcgg
gccgtactcaacggccggctcgatctcacccgtgccgaggcggtgagtgagctggtggcg
gcccgcagccgccgggcggccgaattggccattgcgggcctcgatggcggcattcaggcc
cagatcactgcgctgcgggaacgtctgctcgatcagctcaccgaactggaggcgcgggtg
gatttcgaggaggacctgccgcccctcgatggcgaggccctgcagcagcagctgcaagcc
gtgcgtttggagcttcagcagttggtgcgcgatggcgagcggggcgatgccctgcgcaag
ggcctgcgggtcgccttggtaggtcgccccaacgtgggaaaaagttccctgctcaatcgg
ctcagccgccgcgagcgggcgatcgttaccgatctgccgggcaccactagagatctgctg
gagagcgagatcgcgctggaaggggtgccgatcaccctgctcgacaccgccggcatccgc
agcaccgatgacgcggtggagcgcctggggattgcccgcagcgaggaagctttggccacg
gcggatgtggtgttgttggtgctcgacggccatgcgggctggacctctgaagacgccgcc
ttgctggcgcgcatccccgagcagattcccaggatccttgttgctaacaaggcggatctc
cctgcggggaccttcccccagccggtggatgttcagttgtcggccttggagggcacggga
gaggcagacctggtgcaggtcctgctggagcgttgtggtgctgcaggaaccgaaggggtg
ctgctggctttgaatcaacgccaacgcgatctggccgctcaagccgccgaagccctggcc
tgcagccaggaggtggcggcccagcagctcccgtgggacttctggaccatcgatctgcgg
gaggcgatccgcgcgctaggggagatcaccggagaagagatcaccgaagcggtgctggat
cgggtgttttcgcgcttctgcatcggaaaatag
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