Synechococcus sp. WH 8109: Syncc8109_2615
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Entry
Syncc8109_2615 CDS
T03783
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
syh
Synechococcus sp. WH 8109
Pathway
syh00260
Glycine, serine and threonine metabolism
syh00630
Glyoxylate and dicarboxylate metabolism
syh00670
One carbon pool by folate
syh00785
Lipoic acid metabolism
syh01100
Metabolic pathways
syh01110
Biosynthesis of secondary metabolites
syh01200
Carbon metabolism
Module
syh_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
syh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Syncc8109_2615 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Syncc8109_2615 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Syncc8109_2615 (gcvP)
00670 One carbon pool by folate
Syncc8109_2615 (gcvP)
Enzymes [BR:
syh01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Syncc8109_2615 (gcvP)
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Gene cluster
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AHF64922
UniProt:
W0GXD4
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Position
complement(1984625..1987438)
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AA seq
937 aa
AA seq
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MLNALGYSDLQEFISDVVPADILDPKPPVEALPEGCGEAEALQQLKQLSETNTLRRSLIG
LGYYGTATPALIQRHVFENPAWYTAYTPYQAEIAQGRLEALLNFQTLISELTGLPIANAS
LLDEATAAAEAMSLSFGVCRRSEATRFLVDANVLPQTWAVLQTRAEPLGISLERIDPATA
PIDASVFGVLLQLPGADGCLWDPSAVIEAAHAAGALVTVAIDPLAQTLMAPVGSLGADIA
VGSAQRLGVPMGFGGPHAAFFATVEAYKRQIPGRLVGQSKDAEGRSALRLALQTREQHIR
RDKATSNICTAQVLLAVMASFYAVHHGPDGLQAIAQRIAGLRSQLEQGLRALGYPLELAD
RFDTVTVHCASAPAVHRAAAAAGFNLRVMPDGAAPADATGFGISLDELSDQQELQALLVL
LAEACGQATPQLEAEQPPSLSLPQRSQPWLSQPVFHQYRSESDLLRYIQRLVSRDLSLVH
GMIPLGSCTMKLNAAAELQPVSWPAFAALHPFAPADQAQGYRRLADDLEQWLAALTGFAA
VSLQPNAGSQGEYAGLLVIRAWHRSRGEAHRDICLIPTSAHGTNPASAVMAGLKVVAVAC
DNEGNIDQQDLAAKAAEHADRLAALMVTYPSTHGVFETGIREICSVVHRHGGQVYLDGAN
LNAQVGLCRPGVFGADVCHLNLHKTFCIPHGGGGPGVGPIGVAAHLAPFLPGHPLQAGAA
SAIGPVSASALGSASILPISWMYLRMMGAEALRQASAVALLSANYLAHRLDASYPVLFRG
STGRVAHECILDLRPLKRDAGIDVDDIAKRLMDYGFHAPTVSWPVAGTVMVEPTESESLA
ELDRFADALVAIREEIRAIETGTSDPQNNPLKRAPHTLAAVTADDWDRPYSRQQAAFPME
GQQESKIWPAVARIDNAFGDRNLVCTCPSVEAVAVAA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatgccctgggctacagcgatctgcaggagttcatctctgatgtcgtgcccgcc
gacatccttgatcccaagccgccggttgaggccttgcccgagggttgcggggaggcggag
gctctccagcagctgaagcagttgagcgaaaccaacacgctgcgtcgttccctgatcggg
ctgggttactacggcacggcaaccccggccctgatccagcgccacgtttttgagaatccg
gcttggtacaccgcctacaccccctaccaggcggaaatcgcccagggtcgtctggaggcc
ctgctcaactttcaaaccctgatcagtgagctcacgggcttgccgatcgccaacgcgtcg
ctgctcgatgaagccaccgccgctgcagaggcaatgagcctcagcttcggggtgtgccga
cgctctgaagcgacaaggttcctggtggatgccaatgtgctgcctcagacctgggcggtg
ctgcagacccgcgccgaacccctcggcatcagccttgagcggatcgacccggccacggcg
ccaatcgatgcgtcggtgtttggtgttctgctgcagttgcccggtgccgatggatgcctt
tgggatccatccgccgtgatcgaagcggcccacgcagccggtgccttggtcaccgtggcg
atcgatcccctggcgcagaccctaatggcccccgtgggatccctcggagccgacattgct
gtgggcagcgcccaacgcctgggggtgccgatgggatttggtggtcctcacgccgccttc
ttcgccaccgtagaggcctacaagcgccagatccctggtcgtcttgtggggcagtccaag
gatgcggaaggccgttcggccctccgcttggcgctgcaaacccgtgagcagcacatccgt
cgcgacaaggccactagcaacatctgcacggcccaggtgctgcttgctgtgatggcttcg
ttttatgcggtgcaccatggccctgatggtctgcaggccatcgcccagcgcattgctggc
ctgcgcagccagttggagcagggtctgcgggcccttggttatccgctggagctggccgac
cgcttcgacaccgtcaccgtgcactgtgcgtcggcaccggctgtgcaccgcgctgccgca
gctgctggtttcaatctgcgggtgatgcccgatggtgcagcgccggcggacgccaccgga
ttcggcatcagcctcgatgagctctcggatcaacaggagctgcaagccctgctcgtactg
ctggcggaggcctgcggtcaggccacgccgcagctcgaggctgagcagccgccgtccctc
tccctgccgcagcgcagccagccctggctgagccagccggtttttcaccagtaccggagc
gaatcagatctgttgcgctacatccagcggttggtgagccgtgatctctcgctggtgcac
gggatgattccgttgggcagctgcaccatgaagctcaacgccgccgctgaactgcagccg
gtgagctggcctgcgtttgcggccttgcatccctttgccccagccgatcaggcccagggc
tatcgccgtctggccgacgatctcgagcaatggctggccgcccttacgggctttgccgcc
gtgtcgttgcagcccaatgccggttcccagggggaatatgccgggctgctggtgattcgc
gcctggcaccgctcccgcggtgaagcccatcgcgacatctgtctgatccccaccagcgcc
cacggcaccaatcccgctagtgccgtgatggccggcctgaaggtggtggctgtcgcctgt
gataacgagggcaacatcgatcagcaggatctggcggcgaaggcggccgagcacgccgac
cggctggcggcgctgatggtcacatacccctccacccacggcgtgtttgaaaccggcatc
cgtgagatctgctcggtggtgcatcggcacgggggccaggtgtacctcgatggggccaac
ctcaatgcccaggtggggctgtgccgtcccggtgtcttcggtgccgatgtctgccacctc
aacttgcacaagaccttctgcatcccccatgggggcggtggccctggtgtggggcccatt
ggtgtggcggcgcatctggcccccttccttccggggcaccccttgcaggccggcgccgca
tcggccatcggtccagtgtccgcatctgcgctcggtagcgccagcatcctgccgatcagc
tggatgtacctgcggatgatgggggcggaggccctgcggcaggccagtgccgtggcgctg
ttgtcggccaactacctcgcccatcggcttgatgcctcgtaccccgtgctgtttcgcggc
agcaccggccgggtggcccacgaatgcatccttgacctgcgcccgctcaagcgggatgcg
gggatcgatgtggatgacatcgccaagcgtttgatggactacggcttccatgcgcccacc
gtcagttggccggtggccggcacggtgatggtggagcccaccgaaagcgaaagcctggct
gagttggatcgtttcgccgatgccctggtggcgatccgcgaggagattcgcgccattgaa
accggcaccagcgaccctcagaacaacccgctcaagcgtgctccccacaccctggcggcc
gtcacagcggatgactgggatcgtccctacagccgtcagcaagccgccttcccgatggag
gggcagcaggagagcaagatttggcccgccgtggcacggattgataacgcctttggtgat
cgcaacttggtgtgcacctgtccgtcggtggaagcggtggctgtggcggcttga
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