Sediminicola sp. YIK13: SB49_01600
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Entry
SB49_01600 CDS
T04145
Name
(GenBank) threonyl-tRNA synthetase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SB49_01600
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
syi01007
]
SB49_01600
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syi03016
]
SB49_01600
Enzymes [BR:
syi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
SB49_01600
Amino acid related enzymes [BR:
syi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SB49_01600
Transfer RNA biogenesis [BR:
syi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SB49_01600
Prokaryotic type
SB49_01600
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
tRNA-synt_His
Motif
Other DBs
NCBI-ProteinID:
ALM06646
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Position
complement(342782..344722)
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AA seq
646 aa
AA seq
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MIKITLPDGTIKEHAKGSSPMDVAKGISEGFARNVISAKYNDTIVETVTPLTEDGTLTLY
TWNDKEGKKAFWHSSSHVVAQALEELYPGAKLTIGPAIDNGFYYDVDFGDRSISEKDFQE
IEKKALEIARGKHDYKMRAVTKAEALNKYKAQGNEYKVELIENLEDGTITFCDHDTFTDL
CRGGHIPNTGIIKAIKILSVAGAYWRGNENNKQLTRVYGISFPKQKELTEYLELLEQAKQ
RDHRKLGKELELFTFSAKVGQGLPLWLPKGAALRERLENFLKKAQKKAGYEMVVTPHIGQ
KELYVTSGHYAKYGEDSFQPIRTPKMDEEFLLKPMNCPHHCEIFNFKPHSYKDLPKRFAE
FGTVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLAEEFKNVIDLTLYVLGSLGFGNFT
AQVSVRDLNTPEKYIGSVENWEKAENAIINAATEKGLDFVVESGEAAFYGPKLDFMVKDA
LGRQWQLGTIQVDYNLPERFDLTYKGSDNELHRPVMIHRAPFGSMERFIALLLEHTGGNF
PLWLIPEQAIVLPISEKHEKYAQKVLNSLENHEIRALVDKRSETVGKKIREAEMNKIPFM
LIVGDNEEQENTISVRRHGGDDLGSITLTDFSNLVTNEINSTLKSF
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaattacattgccagacggaacgattaaagaacatgcaaagggtagttctcca
atggatgtggccaaaggaattagcgagggtttcgcaagaaatgtcatctctgcaaaatac
aatgataccatcgtggaaacggtgacccccttaaccgaggacgggacactaactttatat
acatggaacgacaaagaaggtaagaaagctttttggcattcttcttcccacgttgtggcc
caagctttggaagaattgtaccctggcgcaaaactgaccattggaccagctattgacaat
ggcttttattatgatgttgattttggcgaccgaagtatttccgaaaaggactttcaagaa
atagagaaaaaggcccttgaaatagcccgtggcaaacacgattacaagatgcgtgccgtg
accaaagcggaagctttaaataaatataaggcacaaggaaatgaatataaggtagaactg
atagaaaatcttgaagacggtaccattactttctgcgaccatgatacatttaccgatctt
tgtcgcgggggacatatccccaataccgggatcatcaaggccataaaaatattgagtgtt
gccggtgcctactggagaggtaatgaaaacaacaaacagttgacccgtgtctacggcatc
tcctttccaaaacaaaaggaactcacagaatacctagagctattggagcaggccaaacaa
cgcgaccatagaaaattgggcaaggaattggaactattcaccttttccgcaaaagtagga
caaggccttcctttgtggttaccgaaaggagccgcccttagggagcgtttggagaatttc
ttgaaaaaggcccaaaagaaagcaggttacgagatggttgtaacaccacatattggccag
aaggaattgtatgtgacttcaggacattatgccaaatacggggaagatagctttcagcct
atcagaaccccaaaaatggatgaggaatttttgttgaaaccaatgaactgcccccaccat
tgtgagatatttaattttaaaccacattcttacaaagatttaccgaaacgttttgctgaa
tttggcaccgtatataggtatgaacagagcggagaattgcacggtcttaccagagtacgt
ggttttacccaggatgacgcccatatattctgtaccccggaccaattggcggaagaattt
aaaaatgttatagaccttaccttatatgttttgggatctctaggttttggaaatttcacg
gcccaagtatccgtgagggatctcaacacccctgaaaaatacattggatcggttgaaaat
tgggaaaaagcagaaaatgcaattataaatgctgcgacagaaaaagggttggattttgtt
gttgaaagtggggaagctgctttctatggccccaagctggactttatggtaaaggatgcc
ctgggcagacaatggcaattgggaactattcaggtagactacaacttaccggagcgtttt
gaccttacctataaaggcagtgataatgaattgcacagaccggtcatgattcaccgtgca
ccctttggaagtatggagcgattcattgcccttttactggaacatacaggaggaaatttc
cctttatggctgatcccagaacaggctattgtattgcctataagtgagaagcatgaaaaa
tatgcccaaaaagttttaaattccctagaaaatcacgaaattcgcgcccttgtagacaag
agaagtgagactgttggcaaaaaaatacgagaggcagaaatgaacaagataccgtttatg
ctgatcgtaggggacaatgaggaacaggaaaacacgatttctgttagaagacatggaggc
gatgatttaggctccatcaccttgacagacttctccaacttggttactaatgaaataaat
agtaccttaaagtcgttttaa
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