Sediminicola sp. YIK13: SB49_01675
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Entry
SB49_01675 CDS
T04145
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syi03009
]
SB49_01675
Enzymes [BR:
syi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SB49_01675
Ribosome biogenesis [BR:
syi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SB49_01675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
TRAM
PrmA
Cons_hypoth95
Methyltrans_SAM
FtsJ
PCMT
N6_N4_Mtase
Methyltransf_11
UPF0020
Methyltransf_2
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
ALM06655
UniProt:
A0A0S1S866
LinkDB
All DBs
Position
complement(356421..357833)
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AA seq
470 aa
AA seq
DB search
MRKKNKRQIFENVQVIDAGAKGKTIGKAPDGRVIFLTNTVPGDVVDVQTTKKRKAYFEGT
AIKFHTLSDKRTKPECQHFGVCGGCKWQDMAYEHQLFYKQKEVENNLIRIGHLELPTITP
ILGSEKQYFYRNKMEFSFSDSRWLTYDEINSKDEIEDRNALGFHIPGMWDKILDIKKCHL
QADPSNAIRLAVKDFANKHGLPFFNPRNQEGLLRTLMIRTSSNGEIMVLVQFFEDNQEQR
TLLMDFMKETFPEITSLLYVINQKQNDTIYDQKIECYAGRDHIFEEMEGLKFKINAKSFY
QTNSDQAYELYKITREFAGLTGDELVYDLYTGTGTIAQFVAKQAKKVVGIEAVPVAIEDA
KANAKLNNIENVAFFAGDMKNIFNAGFIAANGKPDVIITDPPRDGMHKDVVQQILNIAPK
KVVYVSCNSATQARDLELMKDLYKITKLQPVDMFPQTHHVENVVLLEKRT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaaagaacaaaagacagatcttcgaaaatgtacaggtaatagatgcaggggcg
aagggaaaaacaataggcaaggcaccagacggacgggtaatatttctaaccaacacagtt
ccaggtgatgtagttgatgtacagaccaccaaaaaaagaaaagcttattttgaaggtacc
gctataaaattccacaccttatccgataagagaacaaaacctgaatgccaacactttgga
gtttgcgggggctgcaaatggcaagatatggcctatgagcaccaattattttacaaacaa
aaggaagtagaaaataacttaatacggattgggcatttagaattgccgacaattacccca
atcctaggttccgaaaaacaatatttttaccggaacaaaatggaattctctttctcggat
agccgatggctcacgtatgatgaaattaattcaaaagacgaaatagaggacagaaatgca
cttggcttccatataccaggaatgtgggacaaaattttggacatcaaaaaatgtcactta
caggctgacccgtccaacgccatacgcttggcagtcaaagattttgcgaataaacacggg
cttcctttttttaatcccagaaatcaagaaggattattgcgaacgctaatgatcagaacc
tcctctaatggggaaatcatggtattggtgcaattctttgaagataaccaggaacaacgg
acacttttgatggattttatgaaggaaaccttccctgaaatcacttcattgttatatgtg
atcaaccaaaagcaaaacgatacgatctacgatcaaaagattgaatgttatgcaggacgt
gatcatatctttgaagaaatggaagggttaaagtttaagataaacgcgaaatccttttat
caaaccaattcggatcaggcgtacgaactttataaaataaccagggagtttgcaggactt
acaggagatgaactggtttatgatctgtacaccggtacggggactattgcccaattcgtg
gcaaagcaagccaagaaagtagtagggatagaggcagttcctgtggccattgaagatgca
aaagccaatgcaaaactaaacaatatagaaaatgttgccttttttgcaggtgatatgaaa
aacatcttcaacgccggatttattgccgccaacggcaaaccagatgtaataatcacggat
cccccaagggatggcatgcataaggatgtggtgcaacaaattttgaatattgccccaaaa
aaggtggtttatgtaagttgtaacagtgccacacaggcgagggatctggaattgatgaaa
gacctttacaaaatcaccaaattacaacctgtagatatgtttccgcaaacacaccatgtg
gaaaatgttgtacttttggaaaaaagaacctaa
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