Sediminicola sp. YIK13: SB49_01750
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Entry
SB49_01750 CDS
T04145
Name
(GenBank) thiouridylase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SB49_01750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syi03016
]
SB49_01750
Enzymes [BR:
syi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
SB49_01750
Transfer RNA biogenesis [BR:
syi03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SB49_01750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
Asn_synthase
ThiI
QueC
DUF7411
ATP_bind_3
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
ALM09115
UniProt:
A0A0S1SGW4
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All DBs
Position
379017..380207
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AA seq
396 aa
AA seq
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MKKVVVGLSGGVDSSVTAYLLKEQGYEVIGLFMKNWHDDSVTISDECPWLEDSNDALIVA
EKLGIPFQTVDLSEQYKERIVDYMFHEYEKGRTPNPDVLCNREIKFDVFMKIALQLGADY
VATGHYCRKGTISNPDGTETYQLLAGVDGNKDQSYFLCQLSQEQLAKTLFPIGELTKPEV
RKIAADNDLITADKKDSQGLCFIGKVRLPDFLQQKLKPKKGVIVEVPSSLAHYQTDVPTF
GSKKEELAYYAIKPNYQLEDGRVVGEHQGAHYFTKGQRKGLDVGGTKEPLFVIETDVEDN
IIYTGQGKSHPGLYRRTLFVGNEELHWVRKDLALKVDETMDVMARIRYRQPLQKATLYQT
EGGMYVDFEEKQSAITEGQFVAWYLEDELIGSGVIS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagttgtagtaggactttctgggggagtggattccagtgtaaccgcatacttg
ttaaaagagcaaggttatgaggtgattggcttgtttatgaaaaactggcatgatgattca
gtgaccatttctgatgagtgtccatggttggaggatagtaacgatgcgcttattgtagcc
gaaaaattgggaattccttttcagacggtagatttaagtgagcaatataaggagcggata
gtggattatatgttccacgaatatgaaaagggaagaacccccaacccagatgttctatgc
aatagggaaatcaagttcgatgtctttatgaaaatcgcgcttcaattgggggcagattat
gtagctactggacattattgtaggaaagggaccatcagtaatccagacggtactgaaacc
tatcaacttttggcgggagtagacgggaataaggaccagtcctattttctttgtcaatta
tctcaagaacagttggccaaaacgctcttcccaattggggagctaaccaagcctgaagtc
cgtaagattgcagcggacaacgatttgatcacggcagataaaaaagattcccaaggactt
tgttttattggtaaagtgaggcttcctgattttttacagcagaaactgaaacccaaaaaa
ggggtgatcgtagaagtgccttcgtctttggcccattatcaaacagatgtgccaacgttt
ggttccaaaaaagaagaattggcctattatgccatcaaaccaaattaccagctagaagat
gggagggtagtgggagagcaccagggtgcgcactatttcaccaaaggtcaacgtaaaggc
ctggatgtgggaggaacaaaagaacctttattcgtcattgaaaccgatgtagaagacaat
attatttacacgggacagggaaaaagccatccgggattgtacagacgaaccctttttgta
ggtaacgaggaattgcattgggtgcgtaaagatttggctttaaaagtagatgagacaatg
gatgtaatggcaagaatacgttacaggcaaccgttgcaaaaggccaccttgtatcaaact
gagggaggtatgtatgtagattttgaagagaaacaatcggccataaccgaaggtcaattc
gtggcctggtatctggaagatgaactaataggatcaggagtgatctcgtaa
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