Sediminicola sp. YIK13: SB49_01870
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Entry
SB49_01870 CDS
T04145
Name
(GenBank) glycogen branching protein
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00500
Starch and sucrose metabolism
syi01100
Metabolic pathways
syi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SB49_01870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syi04147
]
SB49_01870
Enzymes [BR:
syi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
SB49_01870
Exosome [BR:
syi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SB49_01870
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
Alpha-amylase
GlgB_N
AMPK1_CBM
Motif
Other DBs
NCBI-ProteinID:
ALM06691
UniProt:
A0A0S1SA93
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Position
401079..402974
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AA seq
631 aa
AA seq
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MPGVLSHSLFSNFDIHLFRSGKHYRLYEKLGSHPMKVDGVEGTYFAVWAPSANAVYVVGD
FNYWQQDHKLNVRWDGSGIWEGFIPGTGKGTLYKYKIHSNNDGIVTEKADPFARSCEHPP
RTASVVWEGNYTWKDEDWMENREAKNGLDCPHSVYEVHLGSWKRKSDNSFMTYKELADDL
VNYVKEMNFTHVEFMPIMEYPYDPSWGYQLTGYFAPTSRFGSPEDFKLLVDKLHQNGIGV
ILDWVPSHFPEDAHGLGMFDGSHLFEHPDKRRGYHPDWKSLIFNYGRNEVRAFLISNALF
WLDQFHADALRVDAVASMLYLDYSREEGEWEPNIYGNNENLEAISFVRELNEAVYLNFNG
VQMIAEESTSFSMVSRPVSIGGLGFGMKWMMGWMNDTLEYFKNDPIHRRHHQNDITFSMT
YTFTENFMLPFSHDEVVYGKQSLLYRMPGDEWQRFANLRLLYGYMFTHPGAKLLFMGAEF
GQSSEWNFQASLDWHLLQYDVHSGIQKLVKDLNTLYRNHPALYEKQFTDEGFQWIDYGDH
ENSVLTFIRKGVNKKDDLIIACNFTPILRLNYRVGIQKAGRLKEIFNTDDEKYGGSGSTN
NKELKVESIPWHGNKKSMELDIPPLGVVILK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcgtactatctcatagtctattttctaatttcgacatacatttattcagatca
ggaaaacattaccgactttatgagaaattaggatcccatcccatgaaggtcgatggggta
gagggtacttattttgctgtttgggctccttctgccaatgctgtttatgttgtcggggat
tttaattattggcaacaggaccataagttgaatgttcgttgggacggcagtggtatttgg
gaaggttttattccagggactggtaagggcacactatataagtataagattcattccaac
aatgatggaatagttactgaaaaggcagatccttttgccagatcctgtgaacatccccct
aggaccgcttcggttgtttgggaagggaactatacatggaaagatgaggattggatggaa
aatagggaagccaaaaatggtttggattgtccgcattctgtttatgaagtgcatttggga
tcctggaaacgcaaaagtgataattcgtttatgacctataaggagttggccgatgatttg
gtcaactacgtgaaggagatgaattttacccatgtggaatttatgcccattatggaatat
ccctatgatccatcgtggggatatcagttaacgggttattttgcacctacttcaagattt
ggaagcccagaagactttaaacttttggtggataagctgcaccaaaatggtattggggta
atcctggattgggtaccgtcccattttcctgaggatgcacacggattagggatgttcgat
ggttcgcatctttttgaacaccccgataaaagaaggggatatcatccagattggaaaagt
ctcatctttaactatggaaggaatgaagtccgtgcttttttaattagcaatgccctgttc
tggttagaccagtttcatgcagatgccttgcgtgtagatgccgtagcttccatgctttac
ctagattattccagggaagaaggggagtgggaaccaaatatatatggaaacaatgaaaat
ctggaagccatttcatttgtaagggagctcaatgaggctgtttacctgaattttaatggg
gtacagatgatagcagaggaatctacctcattttcaatggtatcacgcccggtaagcatt
ggagggctgggttttggtatgaaatggatgatgggttggatgaacgacaccttggaatat
tttaaaaatgaccctatccatagaaggcatcatcaaaatgacatcacctttagcatgacc
tatacgtttaccgaaaatttcatgcttcccttttctcacgatgaggtagtgtatggtaaa
caatccttgttgtaccgtatgccaggtgatgaatggcaacgctttgcaaatttacgactg
ttatatgggtatatgtttacccatcccggtgctaaactcctgtttatgggggccgaattt
ggtcagtcgtccgaatggaattttcaagctagtttggattggcatttacttcaatatgat
gttcattcaggaatccagaaattggtgaaagacttgaataccttatatcgcaatcatccc
gctttatacgaaaaacaatttacggatgaaggctttcaatggatagattatggcgatcat
gaaaattcagtgcttacctttatccgaaaaggggtcaataaaaaagatgatctcatcata
gcctgtaatttcacccccattttaaggcttaattaccgagtagggatacaaaaagcagga
agactgaaagaaatttttaatactgatgatgagaagtacggcggaagcggaagtactaac
aataaggagctcaaagtggaaagtatcccttggcacgggaataaaaaatccatggaattg
gatattccacctttgggtgtagtaatacttaaataa
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