Sediminicola sp. YIK13: SB49_01925
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Entry
SB49_01925 CDS
T04145
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
syi
Sediminicola sp. YIK13
Pathway
syi03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SB49_01925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
syi03011
]
SB49_01925
Ribosome [BR:
syi03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SB49_01925
Bacteria
SB49_01925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
ALM06701
LinkDB
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Position
414891..416729
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AA seq
612 aa
AA seq
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MAEEKTTAQVDETTQDAKETKVETQVQDPKEFLENFNWEKYEQGIERVDDSKLQEFETLV
AKNFVDTADEEVVEGTVVYLTDREAIIDINAKSEGVISLNEFRYNPDLKVGDKVEVLIDI
REDKSGQLVLSHRKARTIMAWDRVNAAHDKEEIVNGFVKCRTKGGMIVDVFGIEAFLPGS
QIDVKPIRDYDQYVGKTMEFKVVKINHEFKNVVVSHKALIEADIEEQKKEIIGQLEKGQV
LEGVVKNITSYGVFIDLGGVDGLIHITDLSWSRINHPNEVVELDQKLNVVILDFDDNKSR
IQLGLKQLEKHPWDALSEEIKVGDKVKGKVVVIADYGAFIEVAEGVEGLIHVSEMSWSTH
LRSAQDFVNVGDEVEAVVLTLDREDRKMSLGIKQLTPDPWTDITTKYPVGSKHKGIVRNF
TNFGVFVEMEEGIDGLIYISDLSWTKKIKHPSEFVTVGDTLEVEVLELDVEGRKLSLGHK
QTTVNPWDKYETEFALDTVHKGAIAEIVDKGATVNFNEDIVAFVPTRHLEKEDGKKLVKG
EEADFKIIEFNKEFKRVVASHTAIFREEEQRNVKAAVRKAAANADEAKPTLGDANEALQA
LKDKMDAAAKKK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaaaaaacaacagcgcaagtagatgaaactacgcaagacgctaaagaaaca
aaagtagagacccaagtacaggatccaaaagagtttttggaaaacttcaattgggaaaag
tatgaacaaggtattgagcgtgttgatgattccaaattacaggaatttgaaacattggta
gctaaaaactttgtggatactgcagatgaggaagtagttgaaggaactgtagtttacctt
acagatcgtgaagctattattgacatcaatgcaaaatctgaaggtgttatctctcttaac
gaatttcgttacaacccagatcttaaggttggagacaaagttgaggtgttgatagatatc
cgtgaggataagagtggacagttggtattatctcacagaaaagccagaactatcatggct
tgggacagagttaatgcagcccacgacaaagaagaaatcgttaatggttttgttaaatgt
agaactaaaggtggtatgatcgttgatgttttcggcatcgaagctttcttgccaggttct
caaatagatgtgaagcctatccgtgactacgatcagtacgtaggaaaaactatggagttc
aaagttgtgaaaatcaaccatgagttcaaaaacgtagtagtatcccacaaagcgttgatc
gaagcggatatcgaagaacagaaaaaagagattatcggtcaattggaaaaaggacaagta
ttggaaggtgttgttaagaacatcacttcttatggtgtctttattgaccttggaggtgtt
gatggtcttatccatatcactgatctttcatggagcagaatcaaccacccgaacgaggtt
gttgaacttgaccagaaattgaacgtggttatcttggatttcgatgacaacaaatctaga
atccaattaggattgaagcaattggagaaacatccttgggatgccttgagcgaagagatc
aaagttggtgataaagtaaaaggtaaagtagtagttattgctgattacggtgcatttatt
gaagtagctgaaggagttgaaggacttattcacgtttctgaaatgtcatggtctacacat
ttgagatctgcacaggatttcgtaaatgttggagacgaagtagaagcagtggtattgact
ttggatagagaagacagaaaaatgtctcttggaatcaagcaattgactccagatccatgg
accgatattactactaaatatccagtaggttccaagcacaaaggaatcgttcgtaacttc
acaaacttcggcgtatttgttgaaatggaagaaggtatcgatggtttgatctatatttca
gatctttcttggactaagaaaatcaagcatccatcagaatttgttaccgttggtgacaca
ttggaagtggaagtattggaattggatgttgaaggacgtaaattgagcttgggccacaaa
cagactactgttaacccatgggacaaatacgaaactgaatttgcattggataccgttcat
aaaggtgccatcgcagagatcgttgacaaaggagctaccgtaaacttcaatgaggacatc
gttgcatttgtaccgacacgtcacttggaaaaagaagatggtaagaaacttgtaaaaggt
gaagaggcagatttcaaaattattgagttcaataaagaattcaaaagagttgtcgctagc
catacagcaatctttagggaagaagagcaacgtaatgtaaaagctgcagttagaaaagct
gctgcaaatgcagacgaagctaaaccaaccttaggtgatgccaacgaagcgttacaagcg
ttgaaagataaaatggacgctgctgccaagaaaaagtaa
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