Sediminicola sp. YIK13: SB49_02125
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Entry
SB49_02125 CDS
T04145
Name
(GenBank) Clp protease ClpC
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
syi03110
]
SB49_02125
Chaperones and folding catalysts [BR:
syi03110
]
Heat shock proteins
HSP100
SB49_02125
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
Sigma54_activat
AAA_16
AAA_22
nSTAND3
AAA_14
AAA_18
TniB
RuvB_N
IstB_IS21
UVR
AAA_7
Zeta_toxin
DUF815
Torsin
AAA_3
ATPase_2
Roc
PhoH
DNA_pol3_delta2
TsaE
AAA_24
KTI12
AAA_25
DUF87
SLFN-g3_helicase
DUF7432
Motif
Other DBs
NCBI-ProteinID:
ALM06737
UniProt:
A0A0S1S8C4
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Position
complement(455940..458492)
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AA seq
850 aa
AA seq
DB search
MDDNFSPRVKDVIAYSKEEALRLGHDFIGTEHLMLGLLRDGNGKAISILDALDVDLDHLR
RKVEILSPANPNPGNIQKDKKNLHLTRQAERALKTTFLEAKLFQSSSINTAHLLLCILRN
ENDPTTKLLHKLKVDYDGVKEQFKSMITSDDDYIDTPRAESFPNDSDESNEGKEGTFGGS
SSSQKGSKKSKTPVLDNFGRDLTQMAEENKLDPVVGREKEIERVSQILSRRKKNNPLLIG
EPGVGKSAIAEGLALRIINKKVSRILYNKRVVTLDLASLVAGTKYRGQFEERMKAVMNEL
EKNDDIILFIDEIHTIVGAGGATGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDG
ALERRFQKVIVEPTTVEETIEILKNIKGKYEDHHNVIYTDEAIVACVKLTNRYMTDRFLP
DKAIDALDEAGSRVHIINMDVPKQILELEKQLEDVRELKNSVVKKQRYEEAAKLRDDEKR
LEKDLAIAQEKWEEDSKLHRETVSEDNVADVVSMMSGIPVNRIAQTESNKLAELPSLIKS
NVIGQDEAVAKVAKAIQRNRAGLKDPDKPIGSFIFLGQTGVGKTQLAKVLAKELFDSEDA
LIRVDMSEYMEKFAISRLVGAPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFN
MLLQVLDDGFLTDSLGRKIDFRNTIIIMTSNIGARQLKDFGQGVGFGTAAMKAQSDSHQK
GVIENALKKAFAPEFLNRIDDVVVFNPLEREDIHKIIDIELRKLFARIKDIGYNLNLTDK
AKDYIAEKGFDKQYGARPLKRAIQKYIEDALAEEIVNSKLNEGDSIYMDLDEKKEELTID
IKKAEESSKT
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggatgataatttttcgccaagggtaaaagatgtaattgcctatagtaaagaggaagcg
ttaaggcttggtcacgattttattggtactgagcaccttatgcttggtctgttgcgcgat
ggaaatggaaaggcaataagcattttggatgcattggatgtagatttggaccacttaaga
agaaaagttgaaatactaagtcctgccaaccccaacccaggcaacatacaaaaggacaaa
aagaacttacatttgactaggcaggctgagcgcgccttaaaaactacgtttctggaagct
aaattattccagagctcttctattaacacagcccatcttttgctttgcattttgagaaat
gagaatgacccaactacaaagttgcttcacaaactgaaagtggattacgatggcgtcaaa
gaacaattcaaatcgatgataaccagtgatgatgattatatagacaccccaagagcagaa
tctttccccaacgactccgatgagagcaatgagggtaaagagggaacatttggtggttct
tcgagctcacaaaagggaagcaaaaagtccaaaactccagtcttggacaattttggaagg
gacctgacgcaaatggccgaggaaaataaattggaccctgttgtaggacgtgaaaaagaa
attgaaagggtctcacaaatattaagtagaagaaaaaagaacaatccgctattgataggg
gaacctggtgttggtaagagtgccattgctgaaggccttgccttgcggataatcaataaa
aaagtatcccgtatcctttacaacaaaagggtggttaccttggatcttgcatccctggta
gcaggcacaaaataccgtggacagttcgaggaacgaatgaaagcggtgatgaacgaattg
gaaaaaaatgacgacatcattttgttcattgatgaaatccataccattgtaggtgctggt
ggagctactggaagtttagatgcttccaatatgttcaagcccgccctggctaggggtgaa
attcaatgtattggtgcaaccactttggacgaataccgtcaatacattgaaaaagacggt
gcattggaacgtcgttttcaaaaggtgatcgttgaacctacaactgtagaggaaaccata
gaaatccttaaaaacatcaaaggaaaatacgaggatcaccacaatgtcatctatacagat
gaagctatcgttgcctgtgtgaaattgaccaaccgttatatgacggataggtttttaccg
gataaggccattgatgcactcgatgaggcaggatccagagtccacatcatcaacatggac
gtgcccaaacaaatcttggaacttgaaaaacagttggaagatgttcgcgaattaaaaaat
agtgttgttaagaaacaacgctatgaagaggctgcgaaactaagggacgatgaaaaaaga
ttggaaaaagatttggccatagcccaagaaaaatgggaagaggacagcaaattacacaga
gaaactgtttctgaggacaatgtggcagatgtagtgtccatgatgagcggtatcccggtg
aacaggatagcacaaacagaaagtaataaattggcagagctgcccagcctaattaaatcc
aacgtcattggacaagatgaagctgtggcgaaggttgccaaagccatacagcgtaatagg
gccgggttaaaagatccggacaaacctattggctccttcattttcctagggcaaaccgga
gtaggtaaaacccaattggcaaaagtactggccaaagaattgttcgactctgaagatgcg
ctgatacgtgtcgacatgagtgagtatatggaaaaatttgctatatccagattggtggga
gcacctccgggatatgtaggttatgaagaaggcggacaattgacggagaaagtaagacgt
aagccttattccgttatactactggatgagatagaaaaagctcacccagatgttttcaat
atgcttttacaagtattggatgacggctttttaacagatagcttgggaaggaagatcgac
ttccgaaacaccatcattatcatgacctccaatattggggccagacaattgaaagatttt
ggccaaggtgtcggttttggtactgccgcaatgaaggcgcaatctgactcacatcaaaaa
ggggttatagagaatgctttaaagaaagcctttgctccagaatttcttaacagaatagat
gatgtggttgtatttaatcctcttgaaagggaagacatccacaaaatcattgatattgag
cttcgcaaattgtttgctagaatcaaagacataggttataacctaaatctaaccgacaag
gcaaaggattatattgcagaaaaaggattcgataaacaatacggtgcacgacctttaaaa
agggccatacagaaatatatagaggatgcactcgctgaagaaatcgttaattccaaactg
aatgaaggcgatagtatctatatggacctcgatgaaaagaaagaagagcttaccattgac
ataaaaaaggctgaggaatcttccaaaacttaa
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