Sediminicola sp. YIK13: SB49_02130
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Entry
SB49_02130 CDS
T04145
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syi03032
]
SB49_02130
03400 DNA repair and recombination proteins [BR:
syi03400
]
SB49_02130
Enzymes [BR:
syi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SB49_02130
DNA replication proteins [BR:
syi03032
]
Prokaryotic type
DNA Topoisomerases
SB49_02130
DNA repair and recombination proteins [BR:
syi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SB49_02130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPD52
Motif
Other DBs
NCBI-ProteinID:
ALM06738
UniProt:
A0A0S1S1X4
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Position
458754..461285
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AA seq
843 aa
AA seq
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MAEGEKLIPINIDDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMHELGVRSNS
AHKKSARIVGEVLGKYHPHGDTSVYDSMVRMAQEWSLRYMLVDGQGNFGSVDGDSPAAMR
YTEARMRKIADEMLADIEKDTVDHQLNFDDSLKEPTVLPAKIPNLLVNGASGIAVGMATN
MPPHNLSEVIDGTVAYIDNNDIEIDELITHIKAPDFPTGGIIYGYDGVVEAFKTGRGRVV
MRAKANIEEVQGKECIIVTEIPYQVNKADMIKKTADLVNDKKIEGISSIRDESDRNGMRI
VYILKRDAIPNIVLNTLYKYTSLQTSFSVNNIALVKGRPQLLNVKEMIHYFVEHRHEVVV
RRTEFDLKKAEDRAHILEGLIIASDNIDEVIAIIRASSNADEARDNLIERFKLSEIQAKA
IVEMRLRQLTGLEQDKLRSEYEEVLATIEDLRDILARKERRMQIIKDELLEMKERYGDLR
RSEINFAGGDLSMEDMIPDEQVVITISHAGYIKRTSLSEYKTQNRGGVGQKASSTRNEDF
LEYLFVGTNHQYMLFFTQKGKCFWMRVYEIPEGSRTSKGRAIQNLINIEQDDTVKAFICT
QDLKDEEYVNNHYVIMATKKGIVKKTSLEQYSRPRQNGINAIGIREGDELLEAKLTTGTS
QIFLGLKSGKAIRFEESKTRPMGRNASGVRGITLADDNDEVIGMVSVHDFDEEILVVSEN
GYGKRSSIDDYRITNRGGKGVKTISITDKTGGLVAIKNVSDSDDLMIINKSGIAIRMSVE
DLRVMGRATQGVRLINIKGNDSIAAVAKVMKDEEEVVDADINDIEVEPENGTALDTNETE
TEE
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggggaaaagttaattccaatcaacattgatgatgaaatgaaatctgcctac
attgattattcaatgtcggtcattgtgtcacgtgccttacctgatgtaagggatggtcta
aagcctgtgcatcgaagggtcttgtacggaatgcacgaattaggtgtaagatcaaacagc
gcgcacaaaaaatctgctagaattgtaggtgaggttttgggtaagtatcaccctcacggg
gatacgtctgtttatgattccatggtacgtatggctcaggaatggagtttgcgctacatg
ttggtagatggtcaaggtaactttggttctgtagatggtgatagtccagctgcaatgcgt
tatacggaggcccgtatgcgtaagatagccgatgaaatgttggctgacatagaaaaggat
accgtagatcatcaattaaactttgatgattccttaaaggagcccactgtgctacctgct
aaaattccaaatttattggtgaatggggcttcaggtattgctgttggtatggctactaac
atgccgccacacaacttatccgaggttattgatggtactgttgcttacatcgacaataac
gatatagagatagatgaactgattacacatatcaaggcaccggattttccaacaggggga
attatatatggttatgatggtgttgtcgaagcctttaaaacgggtcgtggcagggttgta
atgcgcgccaaggcgaatattgaggaagtacagggcaaagaatgtatcattgtcaccgaa
attccatatcaggtcaacaaggctgatatgatcaagaagacggccgaccttgtaaatgat
aaaaagattgagggtatttcaagtattcgtgatgaatccgatagaaatgggatgcgtatc
gtatatatcttgaaaagagacgcgatacccaatatcgtattgaacaccttatataaatac
acttcattacagacctcctttagtgtaaacaacattgccttggtcaaaggaagaccgcaa
ttgttgaatgtaaaggaaatgatccactactttgtggagcatcgtcatgaagttgttgta
agaagaactgaattcgatcttaaaaaagcggaagacagggcccatatacttgaaggtctt
atcatagcctcggataatatcgatgaagtaattgctattatcagggcatcctcaaatgct
gatgaagcacgtgataatttaattgaacgatttaaattatcggaaatacaggcaaaagcc
attgttgaaatgcgccttcgtcaacttaccggactggaacaggataaattgcgttccgaa
tatgaagaggtgttggcaaccatagaggatttaagggatatcttggccagaaaagaacgc
agaatgcaaatcattaaagatgaacttctggaaatgaaggaaagatatggtgatcttaga
cgttcagaaataaattttgctggtggtgacctaagcatggaggatatgatccctgatgag
caggtggttattaccatttcccatgccggctacatcaaaagaacttcactttccgagtac
aagacccaaaataggggtggcgttggtcaaaaagcatcctcgaccagaaatgaagatttc
ttagagtacctatttgttggtaccaaccaccaatatatgttgttcttcacccaaaaagga
aaatgtttctggatgagggtttacgaaattccagaaggcagtaggacttccaaaggtcgt
gctattcagaacttgatcaatatagaacaagatgatactgttaaagcctttatttgtacc
caagacttgaaagatgaggagtatgtgaacaatcattatgtgatcatggccaccaaaaaa
ggtattgtaaagaaaacctctttggagcaatattcaagacctagacaaaatggtatcaat
gctattgggataagggaaggcgatgagctgttggaagccaaattaactaccggtaccagt
cagatattcttaggacttaaatctggaaaggctattcgttttgaagaaagcaaaaccaga
cctatgggtagaaatgcctctggagtgcgagggataaccttggcagatgataacgatgaa
gtgatcggaatggtttctgttcatgattttgatgaggagattcttgtagtttcggaaaat
ggatatggtaaacgttccagtatcgatgattacagaattaccaataggggtggtaaaggt
gttaaaactatttccattaccgataagacagggggacttgttgccattaagaatgtctcc
gattctgacgatcttatgatcattaataaatctgggattgctatacgtatgagtgtggaa
gatctaagggttatgggaagagctacccaaggagttcgtttgatcaatattaaaggaaac
gattctatcgctgcagtggccaaggtcatgaaggacgaagaagaagttgttgatgccgat
attaacgatattgaggtagaacctgagaatggcacggctcttgatactaatgaaaccgaa
acagaagaataa
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