Sediminicola sp. YIK13: SB49_02445
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Entry
SB49_02445 CDS
T04145
Name
(GenBank) capsule biosynthesis protein CapI
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00053
Ascorbate and aldarate metabolism
syi00520
Amino sugar and nucleotide sugar metabolism
syi01100
Metabolic pathways
syi01240
Biosynthesis of cofactors
syi01250
Biosynthesis of nucleotide sugars
Module
syi_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
SB49_02445
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
SB49_02445
Enzymes [BR:
syi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
SB49_02445
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
NAD_binding_10
VIGSSK
Ldh_1_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
ALM06790
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Position
complement(533682..534710)
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AA seq
342 aa
AA seq
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MKILVTGAAGFIGFHVALNLVQKGHEVLGLDNINGYYDTKLKFARLNLLGISQIDATPFN
IVCSSQLHGGNFRFVRMDIENREKLPKLFRKEKFDIVCNLAAQAGVRYSLENPEVYVDSN
VVGFLNILECCRHFKIKHLVYASSSSVYGLNKNIPFKIEDSVDKPISLYAATKKSNELMA
HSYSNLFGIPTTGLRFFTVYGPWGRPDMALFLFTDAIAKNKPIKVFNNGQMARDFTYIED
IVEGVIRVIEGDLNERITTENLYKLYNIGNNKAVKLLDFIKEIESNLKKTAIKEMLPMQS
GDVENTWANIDDLIKDYNYYPKTSVKIGVKNFVLWFKEYYKL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatattagttaccggagctgcaggatttattggttttcatgttgcattaaactta
gtgcaaaaaggacatgaggtgttaggcctagacaatataaatgggtattacgacaccaaa
ttaaaatttgctagattaaatcttctaggtatttctcaaattgatgcaacgccatttaac
attgtttgttcaagtcaattgcatggaggtaattttcgttttgttagaatggatattgaa
aatcgggaaaaactaccaaaattatttagaaaagaaaaatttgatattgtctgtaatcta
gctgcgcaggcaggggtgcgttatagcttagaaaaccctgaagtatatgtagatagtaat
gtggttggttttctaaacattttagaatgttgcagacactttaaaattaaacacttagtt
tatgccagtagttcgagtgtttatggactaaataaaaacatcccctttaaaatagaggat
tctgttgacaaacctataagcctttacgcagctaccaaaaagagcaatgaactaatggca
cattcctacagtaatctatttggaataccaacaacagggcttcgattctttactgtatat
gggccatggggaagacctgacatggctctttttttgtttacagatgctattgctaaaaac
aagccaataaaggtgtttaacaatggacaaatggcaagggattttacttatatagaggat
atagttgaaggagttatccgggttattgaaggtgatttaaatgaaagaattaccacagaa
aatttatataaattatacaatatcggaaataataaagctgttaaattgttagatttcata
aaagaaatagaatctaatcttaaaaaaacagccataaaagagatgctccccatgcaatcc
ggagatgtagagaatacatgggcaaacattgatgatttaattaaagattataattattac
cctaaaacatctgtgaaaattggggttaaaaattttgtattatggttcaaagagtattac
aaattataa
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