Sediminicola sp. YIK13: SB49_02785
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Entry
SB49_02785 CDS
T04145
Name
(GenBank) FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syi03400
]
SB49_02785
Enzymes [BR:
syi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SB49_02785
DNA repair and recombination proteins [BR:
syi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SB49_02785
Prokaryotic type
SB49_02785
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF2625
Motif
Other DBs
NCBI-ProteinID:
ALM06847
UniProt:
A0A0S1S8U8
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All DBs
Position
complement(627298..628785)
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AA seq
495 aa
AA seq
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MVIVWFKRDLRLMDHEPLSNAIAQNQKIVLLYSFEPLWTKDPHYSEMHMDFIKQSLLDMN
NQLGTFNTQMLIVSQNIPEVLRALHGKEKITHIFSHQESGMQMTYERDKQVTQWCIAQKV
LWKESIQNGVLRGRKNRTDWRKSWVSFMNQKIENPRLDLGEFYTTEELRSIFHPLFQIPK
LKPATNPLIQKGGTKQGVKYLRSFIDQRIEGYNVHYSKPYSSRKHSSRLSPYLAWGNLSV
RQICQFAANHKASIRDKRTLNAFLSRLRWQAHFIQKFEMEGRMEFVSINAGYHQLVKPIR
PDLQKAWREGQTGVPMVDAAMRCLIQTGFVNFRLRALLASFFTHLLWQPWQDCTEHLAQH
FLDFEPGIHFPQLNMQAGETGINTIRIYNPVKNGIDHDPEGTFIKKWVPELANLPKQYLH
EPWNIPPMEQQFLNFELGKDYPKPVVDLQKARKYASDSLWEFKNSVQVKLEGKRILKKHT
LPGRPVWDNQGAIEF
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggttattgtttggtttaaaagagacctgaggttaatggatcatgagcctctttcaaat
gccattgcacagaaccaaaaaatagtattgctatatagctttgagccactttggaccaaa
gaccctcattatagtgaaatgcacatggactttataaaacaaagtctattggacatgaac
aatcaattggggacattcaatacccaaatgcttatagtttcccaaaatattcctgaagtt
ttgagggcattgcatggcaaagaaaaaattacccatatcttttcgcatcaagaatcggga
atgcaaatgacctatgagcgagataaacaagtcacccagtggtgtattgcacaaaaggtc
ctatggaaggaaagcattcaaaacggcgtcctgagaggtcgtaaaaatcgtacagactgg
cgaaagagttgggtgagttttatgaaccaaaaaattgaaaacccgagattggatctaggg
gaattctacaccacagaagaactcagatctatttttcatccactttttcaaattcccaaa
cttaaacctgccaccaatccattaattcaaaaaggaggcactaaacaaggtgttaaatat
ttgcgttcctttatagatcagcgcatagaggggtataacgtccattactcaaagccctac
tcctcaagaaaacacagcagtagactttctccttatttggcatggggcaatctgtcggtg
cgccaaatttgtcaatttgctgcgaaccataaagcgtctataagggataaaagaacatta
aatgcttttttatcccgcctacgatggcaagcacacttcatccaaaaatttgagatggag
gggcgcatggaatttgtgagtattaatgctggatatcaccaattggtaaaaccaattcga
ccagatttacaaaaagcatggagagaagggcaaacaggcgtacccatggtagatgcagcc
atgcgctgtttgatacagacaggatttgtcaactttcgactccgagctctactagcgtca
ttttttacgcacctcttgtggcaaccttggcaagattgcacggaacatttggcacaacac
tttttagattttgagcccggaatacatttccctcagctaaatatgcaggccggggaaaca
ggaattaatacgatcaggatctataacccggtgaaaaatggaatagaccacgacccggag
ggaacttttataaaaaaatgggtaccggaacttgccaaccttccaaagcaatatcttcat
gagccctggaatattcctcctatggaacaacaatttttaaactttgaacttggaaaagac
tatcccaaacccgtggtggatttacaaaaagcaagaaaatatgccagcgactcgctttgg
gagtttaaaaattccgttcaggtaaaactggaaggaaaaagaatcctaaaaaaacacact
ttgcctggaagacccgtttgggataaccaaggagccatagaattctaa
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