Sediminicola sp. YIK13: SB49_02980
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Entry
SB49_02980 CDS
T04145
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
syi
Sediminicola sp. YIK13
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
syi03000
]
SB49_02980
Transcription factors [BR:
syi03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
SB49_02980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HTH_5
RavZ_cat
HTH_11
Spectrin_SYNE1
HTH_6
Rrf2
HTH_1
MarR
DUF7343
DUF6842
Motif
Other DBs
NCBI-ProteinID:
ALM06881
LinkDB
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Position
complement(673044..673676)
Genome browser
AA seq
210 aa
AA seq
DB search
MIKELKENYQHIFEEALLEEINQVGTYKEIPEGFKLMEIGNYIKSMPLLVSGVVKILRED
DNGDELLLYFLEQGDTCAMTLTCCMGQTKSEIRAISETDTKLIMVPVHKMEEWMAKYHSW
RKFILQSYHERLNDLFQTVDSIAFLKMDERLLKYLKDKARVTNDNTINSTHQEIAYELHT
SRVVISRLLKKLENMGQVALFRNYIKLKEG
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggaacttaaagaaaactatcaacatatttttgaggaagccttactggaagaa
atcaaccaagtggggacctacaaggaaattccagaaggatttaaactaatggaaataggc
aactacattaaatccatgcccctccttgtttccggggtggtaaaaatacttcgtgaggac
gacaacggagatgaacttctactctattttttggaacaaggagatacttgtgccatgacc
ttgacctgttgcatggggcagaccaaaagtgaaatcagggctatttcagaaacagatacc
aagttgatcatggtccctgttcataaaatggaagaatggatggccaagtaccatagttgg
cgtaaatttatcttacagagctatcatgaaaggctgaatgatttgttccagactgttgac
agtatagcttttctaaaaatggacgagaggctcttaaaatacctaaaggataaggcgcgt
gtcaccaacgataacaccataaatagcacccatcaggaaattgcctatgaactccatacc
tccagggttgttatttcccgtttattaaaaaaactggaaaatatggggcaggtagcactt
tttaggaactatataaaattgaaagaagggtag
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